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Backup all raw Proteomic Data to owl #46

Closed sr320 closed 6 years ago

sr320 commented 7 years ago

see and expand on https://github.com/RobertsLab/resources/wiki/Data-Management#proteomics-data-management-plan

kubu4 commented 7 years ago
laurahspencer commented 7 years ago

Added P_generosa folder and copied all geoduck proteomics .raw files as well as the methods & sequence files associated with the mass spec runs.

On Thu, Sep 7, 2017 at 10:02 PM, kubu4 notifications@github.com wrote:

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Create readme file template for use in all directories containing raw data. Decide on storage location for data management templates (e.g. resources/data_management_templates) and store template(s) there.

Add readme file to http://owl.fish.washington.edu/phainopepla/

Add readme file to http://owl.fish.washington.edu/phainopepla/C_gigas/

Add readme file to http://owl.fish.washington. edu/phainopepla/C_gigas/2015-12-30/ http://owl.fish.washington.edu/phainopepla/C_gigas/2015-12-30/

Add readme file to http://owl.fish.washington. edu/phainopepla/C_gigas/2016-12-05/ http://owl.fish.washington.edu/phainopepla/C_gigas/2016-12-05/

Add readme file to http://owl.fish.washington. edu/phainopepla/P_generosa/

Add readme file to http://owl.fish.washington. edu/phainopepla/P_generosa/2017-01-23/ http://owl.fish.washington.edu/phainopepla/P_generosa/2017-01-23/

Add readme file to http://owl.fish.washington. edu/phainopepla/P_generosa/2017-07-16/ http://owl.fish.washington.edu/phainopepla/P_generosa/2017-07-16/

— You are receiving this because you were assigned. Reply to this email directly, view it on GitHub https://github.com/RobertsLab/resources/issues/46#issuecomment-327999529, or mute the thread https://github.com/notifications/unsubscribe-auth/AQdwfQCAr8cUwMU-ZZmOY18y9WjlzHpbks5sgMpXgaJpZM4PQNBh .

-- Cheers, Laura H Spencer Graduate Student School of Aquatic & Fishery Sciences University of Washington, Seattle

yaaminiv commented 7 years ago

Added my C. gigas data and README.md files:

2017-01-23 2017-07-10

kubu4 commented 7 years ago

@yaaminiv - I'm not seeing readme files in any of the directories in either of those links.

laurahspencer commented 7 years ago

@kubu4 would you like me to create readme files for my P. generosa raw data folders as per a template? image

kubu4 commented 7 years ago

No template file has been created. Eventually someone will establish a template readme file which will make it easier/uniform to produce a readme file.

But, you should definitely put readme files in each of your directories, even if no template file exists (which it currently does not).

yaaminiv commented 7 years ago

@kubu4 I see them when I log into OWL:

screen shot 2017-10-18 at 2 01 10 pm

Does this have anything to do with the fact that they're markdown files?

kubu4 commented 7 years ago

Ah! Actually, I think it has to do with the capitalization. Use all lowercase and then they should be listed in the publicly accessible index of the directories.

yaaminiv commented 7 years ago

@kubu4 fixed!

kubu4 commented 7 years ago

I just saw that. Nice! Boom!

Now, you just need readme files in the subdirectories, too... :)

sr320 commented 6 years ago

Lets get this wrapped up..

sr320 commented 6 years ago

moved to hackweek