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ideas for visualization/analyses of ind. crab gene expression across time? #933

Closed grace-ac closed 4 years ago

grace-ac commented 4 years ago

I have gene expression data from INDIVIDUAL crabs over time.

Want to analyze/visualize how gene expression in an individual changes across time.

Any ideas on analyses/visualizations that would best do this? How to do that?

I think @shellytrigg has done something like this in your oyster paper...

shellywanamaker commented 4 years ago

@grace-ac you could do a heatmap or make a line plot with abundance over time. My code to make the heatmaps and line plots in my oyster paper is here: https://github.com/shellytrigg/paper-OysterSeed-TimeXTemp/blob/master/Analyses/PCA_ASCA_Functional_Analysis/PCA_ASCA_Functional_Analysis.Rmd