RobokopU24 / Feedback

Feedback on the ROBOKOP project
https://robokop.renci.org
0 stars 0 forks source link

Automat UberonGraph/UberGraph metadata #136

Closed karafecho closed 4 months ago

karafecho commented 1 year ago

This issue is to report that the Automat metadata for UberonGraph/UberGraph is incomplete (e.g., missing URLs). Note also the inconsistent nomenclature, i.e., UberonGraph vs UberGraph.

{
  "graph_id": "UberGraph_Automat",
  "graph_version": "7aafc2274afcbf05",
  "sources": [
    {
      "source_id": "UberGraph",
      "source_version": "2023-01-04",
      "release_version": "a1bcc3c55882e946",
      "parsing_version": "1.2",
      "supplementation_version": "1.0",
      "normalization_scheme": {
        "node_normalization_version": "2.0.9",
        "edge_normalization_version": "v3.1.2",
        "normalization_code_version": "1.0",
        "conflation": false,
        "strict": true
      },
      "merge_strategy": "default",
      "normalization_version": "2.0.9_v3.1.2_1.0_strict",
      "provenance": "infores:ubergraph",
      "description": "",
      "source_data_url": "",
      "license": "",
      "attribution": "",
      "normalized_nodes.jsonl": {
        "nodes": 2997358
      },
      "normalized_edges.jsonl": {
        "edges": 3558038
      }
    },
    {
      "source_id": "OntologicalHierarchy",
      "source_version": "2023-01-04",
      "release_version": "04ef3064a23ad10a",
      "parsing_version": "1.2",
      "supplementation_version": "1.0",
      "normalization_scheme": {
        "node_normalization_version": "2.0.9",
        "edge_normalization_version": "v3.1.2",
        "normalization_code_version": "1.0",
        "conflation": false,
        "strict": true
      },
      "merge_strategy": "connected_edge_subset",
      "normalization_version": "2.0.9_v3.1.2_1.0_strict",
      "provenance": "infores:ontological-hierarchy",
      "description": "",
      "source_data_url": "",
      "license": "",
      "attribution": "",
      "normalized_nodes.jsonl": {
        "nodes": 236
      },
      "normalized_edges.jsonl": {
        "edges": 60193130
      }
    }
  ],
  "subgraphs": [],
  "build_status": "stable",
  "build_time": "02-09-23 03:37:21",
  "build_error": null,
  "final_node_count": 2997594,
  "final_edge_count": 63751168,
  "merged_nodes": 0,
  "merged_edges": 0
}
karafecho commented 1 year ago

Confirmed that correct nomenclature is: Ubergraph.

cbizon commented 4 months ago

Is this still an issue?

karafecho commented 4 months ago

I confirmed that the issue has been resolved, so closing ticket ...