RobokopU24 / ORION

Code that parses datasets from various sources and converts them to load graph databases.
MIT License
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Illegal characters in CURIES #190

Open cbizon opened 11 months ago

cbizon commented 11 months ago

eg. {"id":"CAID:CA11778160","name":"rs17656641","category":["biolink:GenomicEntity","biolink:PhysicalEssenceOrOccurrent","biolink:BiologicalEntity","biolink:Entity","biolink:OntologyClass","biolink:ThingWithTaxon","biolink:NamedThing","biolink:PhysicalEssence","biolink:SequenceVariant"],"equivalent_identifiers":["ROBO_VARIANT:HG38|4|48830113|48830114|T|C","CAID:CA11778160^C","HGVS:NC_000004.10:g.48526888T>C","HGVS:CM000666.1:g.48832131T>C","HGVS:CM000666.2:g.48830114T>C","HGVS:NC_000004.11:g.48832131T>C","HGVS:NC_000004.12:g.48830114T>C","DBSNP:rs17656641"]}

It turns out that both | and > are illegal in CURIEs