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RobotLocomotion / drake

Model-based design and verification for robotics.
https://drake.mit.edu
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suggested updates to the install process on Ubuntu ... #1745

Closed mjhmilla closed 8 years ago

mjhmilla commented 8 years ago

Installing Drake on Ubuntu was pretty smooth for such a large and complex code base - well done! Along the way I encountered a few things that you might update/change to make it even easier the next time around.

I) Installation: I had to update the following files to get Drake to fully install in ubuntu:

  1. drake_ubuntu/install_prereqs.sh: changed line 24 from SUBDIRS="drake externals to SUBDIRS="externals"
  2. drake_ubuntu/externals/install_prereqs.sh changed 2 occurances of : ../pod-build/drake_external_source_dirs.txt to ../drake_external_source_dirs.txt

II) Install documentation: It would also be helpful to add 2 notes to the documentation:

  1. When running cmake leave the CMAKE_INSTALL_PREFIX set to 'drake_distro/build'. Why? I changed this folder and then found I had to update addpath_drake.m to work ... after which I decided to stick with the original folder name to prevent further problems.
  2. Under 'Build the collection' add a step: cd drake_distro/drake make Why? Otherwise the rimless wheel and monopod hopper examples don't run because the mex files haven't been compiled. At the moment when one of these examples fails it actually tells you to complete the above step, which is pretty thoughtful.

III) Remaining build errors: I still have build errors for some of the external libraries, though they are not show-stoppers. As a note, in the cmake file I set WITH_ALL_PUBLIC_EXTERNALS to ON. Yes, I've run make multiple times and this one doesn't go away. Here's the error:

make[9]: *** [src/CMakeFiles/iris_geometry.dir/geometry.cpp.o] Error 1 make[8]: *** [src/CMakeFiles/iris_geometry.dir/all] Error 2 make[7]: *** [all] Error 2 make[6]: *** [iris_project-prefix/src/iris_project-stamp/iris_project-build] Error 2 make[5]: *** [CMakeFiles/iris_project.dir/all] Error 2 make[4]: *** [all] Error 2

RussTedrake commented 8 years ago

Very helpful, thanks. We just recently updated IRIS. If you can show us more of the error output, that would help us debug.

mjhmilla commented 8 years ago

Attached is all of the command prompt output from calling make in drake_distro. I also went into externals/iris and ran make - that output is attached as well. That output is much more useful:

In file included from /home/mjhmilla/dev/drake/externals/iris/iris/src/geometry.cpp:5:0: /home/mjhmilla/dev/drake/externals/iris/iris/src/iris_cdd.cpp:2:21: fatal error: setoper.h: No such file or directory

include "setoper.h"

The file "setoper.h" is in

/home/mjhmilla/dev/drake/externals/iris/pod-build/cdd_project-prefix/src/cdd_project/lib-src and a link to it /home/mjhmilla/dev/drake/externals/iris/pod-build/cdd_project-prefix/src/cdd_project/lib-src-gmp

so I think a fix is at hand with an edit to IRIS's Cmake file. Is it a problem that my root directory is named 'drake' rather than 'drake_ubuntu' or something like that?

Matt

On Wed, Feb 24, 2016 at 12:42 PM, Russ Tedrake notifications@github.com wrote:

Very helpful, thanks. We just recently updated IRIS. If you can show us more of the error output, that would help us debug.

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188214748 .

-- CMAKE_INSTALL_PREFIX=/home/mjhmilla/dev/drake/build -- Preparing to build cmake with dependencies: -- Preparing to build textbook with dependencies: -- Preparing to build eigen with dependencies: -- Preparing to build lcm with dependencies: -- Preparing to build libbot with dependencies: lcm -- Preparing to build bullet with dependencies: -- Preparing to build spotless with dependencies: -- Preparing to build director with dependencies: lcm;libbot -- Preparing to build signalscope with dependencies: director -- Preparing to build octomap with dependencies: -- Preparing to build mosek with dependencies: -- Preparing to build iris with dependencies: eigen;mosek -- Preparing to build yalmip with dependencies: -- Preparing to build avl with dependencies: -- Preparing to build xfoil with dependencies: -- Preparing to build meshconverters with dependencies: -- Preparing to build swigmake with dependencies: -- Preparing to build swig_matlab with dependencies: -- Preparing to build drake with dependencies: cmake;eigen;lcm;libbot;bullet;octomap;swig_matlab;swigmake -- Installation will include extra example: LittleDog -- Preparing to install precompiled snopt -- Configuring done -- Generating done -- Build files have been written to: /home/mjhmilla/dev/drake [ 0%] [ 1%] [ 1%] [ 2%] [ 2%] [ 2%] Performing update step for 'download-avl' Performing update step for 'download-cmake' [ 2%] Performing update step for 'download-director' Performing update step for 'download-libbot' Performing update step for 'download-lcm' Performing update step for 'download-eigen' Performing update step for 'download-bullet' [ 2%] Performing update step for 'download-LittleDog' [ 2%] [ 2%] [ 2%] [ 2%] [ 2%] [ 3%] [ 4%] No configure step for 'download-libbot' No configure step for 'download-bullet' No configure step for 'download-lcm' No configure step for 'download-avl' No configure step for 'download-director' No configure step for 'download-cmake' No configure step for 'download-eigen' [ 4%] [ 4%] [ 4%] [ 5%] [ 6%] No configure step for 'download-LittleDog' [ 6%] [ 6%] No build step for 'download-avl' No build step for 'download-bullet' [ 6%] No build step for 'download-libbot' No build step for 'download-director' No build step for 'download-lcm' No build step for 'download-cmake' [ 7%] [ 7%] No build step for 'download-eigen' [ 7%] [ 8%] No install step for 'download-bullet' [ 8%] No build step for 'download-LittleDog' [ 8%] No install step for 'download-avl' [ 8%] No install step for 'download-director' [ 8%] No install step for 'download-libbot' No install step for 'download-cmake' No install step for 'download-lcm' No install step for 'download-eigen' [ 9%] [ 9%] [ 9%] [ 9%] [ 10%] [ 10%] [ 10%] Completed 'download-cmake' Completed 'download-avl' Completed 'download-bullet' Completed 'download-director' Completed 'download-lcm' No install step for 'download-LittleDog' [ 11%] Completed 'download-libbot' Completed 'download-eigen' [ 12%] Completed 'download-LittleDog' [ 12%] [ 14%] [ 14%] Built target download-director Built target download-lcm [ 14%] Built target download-cmake Built target download-bullet [ 16%] [ 17%] Built target download-avl Built target download-eigen [ 19%] Built target download-libbot [ 19%] [ 20%] [ 20%] [ 20%] Performing update step for 'download-iris' [ 21%] [ 21%] [ 22%] Built target download-LittleDog Performing update step for 'download-meshconverters' Performing update step for 'download-mosek' Performing update step for 'download-octomap' [ 24%] Built target download-snopt-precompiled Performing update step for 'download-spotless' Performing update step for 'download-signalscope' [ 24%] [ 24%] Performing update step for 'download-swig_matlab' [ 25%] [ 26%] [ 26%] No configure step for 'download-iris' [ 26%] Performing update step for 'download-swigmake' [ 26%] [ 26%] No configure step for 'download-signalscope' No configure step for 'download-meshconverters' No configure step for 'download-mosek' No configure step for 'download-spotless' No configure step for 'download-octomap' [ 26%] [ 27%] [ 28%] [ 28%] [ 29%] No build step for 'download-mosek' [ 30%] [ 30%] No build step for 'download-spotless' No build step for 'download-signalscope' No build step for 'download-meshconverters' No build step for 'download-iris' No configure step for 'download-swig_matlab' No build step for 'download-octomap' [ 30%] [ 30%] No configure step for 'download-swigmake' [ 31%] [ 31%] No install step for 'download-mosek' [ 31%] [ 32%] [ 32%] No install step for 'download-meshconverters' No install step for 'download-spotless' [ 32%] No install step for 'download-iris' No install step for 'download-signalscope' [ 32%] No build step for 'download-swig_matlab' No install step for 'download-octomap' [ 32%] [ 32%] Completed 'download-mosek' No build step for 'download-swigmake' [ 33%] [ 33%] Completed 'download-meshconverters' [ 33%] [ 34%] [ 35%] [ 35%] Completed 'download-signalscope' Completed 'download-iris' Completed 'download-spotless' No install step for 'download-swig_matlab' Completed 'download-octomap' No install step for 'download-swigmake' [ 36%] Built target download-mosek [ 36%] Built target download-meshconverters [ 38%] Built target download-iris [ 38%] [ 38%] [ 38%] [ 39%] [ 40%] [ 40%] Built target download-octomap Built target download-signalscope Built target download-spotless Performing update step for 'download-textbook' Completed 'download-swig_matlab' [ 40%] Completed 'download-swigmake' Performing update step for 'download-xfoil' [ 40%] [ 40%] Performing forceconfigure step for 'octomap' [ 41%] [ 41%] [ 42%] Built target download-swig_matlab Performing update step for 'download-yalmip' Force configure of octomap Performing forceconfigure step for 'mosek' Performing forceconfigure step for 'eigen' [ 42%] Built target download-swigmake [ 42%] [ 42%] Force configure of mosek No configure step for 'download-xfoil' [ 42%] No configure step for 'octomap' Force configure of eigen [ 42%] No configure step for 'mosek' [ 42%] [ 43%] [ 43%] [ 43%] Performing forceconfigure step for 'spotless' Performing forceconfigure step for 'meshconverters' [ 43%] No configure step for 'download-yalmip' Performing configure step for 'eigen' No build step for 'download-xfoil' Force configure of spotless Performing build step for 'octomap' [ 43%] Force configure of meshconverters [ 43%] [ 44%] [ 44%] Performing build step for 'mosek' Performing configure step for 'spotless' [ 44%] No build step for 'download-yalmip' No install step for 'download-xfoil' No configure step for 'meshconverters' [ 44%] [ 45%] [ 45%] No install step for 'download-yalmip' Performing build step for 'meshconverters' -- CMAKE_INSTALL_PREFIX=/home/mjhmilla/dev/drake/build -- CMAKE_INSTALL_PREFIX=/home/mjhmilla/dev/drake/build Completed 'download-xfoil' [ 46%] [ 6%] Built target octomath Completed 'download-yalmip' [100%] Built target liblast make[4]: warning: jobserver unavailable: using -j1. Add +' to parent make rule. [ 12%] Built target octomath-static [ 48%] Install the project... Built target download-xfoil [ 49%] -- Install configuration: "RelWithDebInfo" -- Up-to-date: /home/mjhmilla/dev/drake/install/include/mosek/mosek.h -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/libmosek64.so.7.1 -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/libmosek64.so -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/libiomp5.so -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/pkgconfig/mosek.pc -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/python2.7/dist-packages/mosek/fusion/SolverInfo.py -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/python2.7/dist-packages/mosek/fusion/__init__.py -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/python2.7/dist-packages/mosek/fusion/Utils.py -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/python2.7/dist-packages/mosek/array.py Built target download-yalmip -- Up-to-date: /home/mjhmilla/dev/drake/install/lib/python2.7/dist-packages/mosek/__init__.py -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_r_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_lib_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_bin_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_include_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_pkgconfig_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_base_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_data_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_config_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/pods_get_models_path.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/addpath_mosek.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/rmpath_mosek.m -- Up-to-date: /home/mjhmilla/dev/drake/install/matlab/javaaddpathProtectGlobals.m -- Up-to-date: /home/mjhmilla/dev/drake/install/share/java/mosekmatlab.jar [ 33%] Built target octomap -- Configuring done [ 54%] Built target octomap-static -- Generating done -- Build files have been written to: /home/mjhmilla/dev/drake/externals/spotless/pod-build [ 49%] Performing forceconfigure step for 'avl' [ 56%] Built target binvox2bt [ 50%] [ 50%] Force configure of avl -- Configuring done Performing build step for 'spotless' [100%] [ 51%] Built target convert_to_obj -- Generating done Performing forceconfigure step for 'bullet' -- Build files have been written to: /home/mjhmilla/dev/drake/externals/eigen/pod-build [100%] Built target liblast [ 58%] No configure step for 'avl' Built target bt2vrml Force configure of bullet [ 51%] make[3]: warning: jobserver unavailable: using -j1. Add+' to parent make rule. [ 51%] Performing configure step for 'bullet' [ 51%] Install the project... [ 52%] [ 60%] Performing build step for 'eigen' Built target compare_octrees Performing build step for 'avl' No install step for 'mosek' -- Install configuration: "RelWithDebInfo" -- Up-to-date: /home/mjhmilla/dev/drake/install/bin/convert_to_obj [ 52%] make[3]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule. [ 62%] Built target convert_octree Completed 'mosek' [100%] Built target pathfiles [ 52%] No install step for 'meshconverters' Install the project... [ 2%] Built target xwin [ 64%] -- Install configuration: "RelWithDebInfo" -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_r_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_lib_path.m Built target edit_octree -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_bin_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_include_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_pkgconfig_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_base_path.m [ 53%] -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_data_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_config_path.m -- Installing: /home/mjhmilla/dev/drake/build/matlab/pods_get_models_path.m -- Up-to-date: /home/mjhmilla/dev/drake/build/matlab/addpath_spotless.m -- Up-to-date: /home/mjhmilla/dev/drake/build/matlab/rmpath_spotless.m Built target mosek [ 54%] [100%] Built target eigen Completed 'meshconverters' [ 5%] [ 66%] Built target eispack Built target eval_octree_accuracy [ 68%] Install the project... Built target graph2tree [ 55%] No install step for 'spotless' -- Install configuration: "RelWithDebInfo" -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/SuperLUSupport -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/CholmodSupport -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/SparseCholesky -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/Cholesky -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/Geometry -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/Core -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SuperLUSupport -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SuperLUSupport/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SuperLUSupport/SuperLUSupport.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/CholmodSupport -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/CholmodSupport/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/CholmodSupport/CholmodSupport.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/CMakeLists.txt -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SparseCholesky -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SparseCholesky/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Cholesky -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Cholesky/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Cholesky/LLT.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Cholesky/LDLT.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Cholesky/LLT_MKL.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/OrthoMethods.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/arch -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/arch/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/arch/Geometry_SSE.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Homogeneous.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Umeyama.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/AngleAxis.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Transform.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Rotation2D.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Translation.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/RotationBase.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Hyperplane.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/ParametrizedLine.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Quaternion.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/EulerAngles.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/AlignedBox.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Geometry/Scaling.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/SolveTriangular.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Assign_MKL.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Inverse.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Diagonal.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/ArrayWrapper.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/GlobalFunctions.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Solve.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Visitor.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/SpecialFunctions.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/Block.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/CMakeLists.txt -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/Default -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/Default/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/Default/Settings.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/AVX -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/Eigen/src/Core/arch/AVX/Complex.h -- Up-to-date: 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Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_reduction.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_image_patch.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_convolution.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_thread_pool.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_fft.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_const.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/openglsupport.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/polynomialsolver.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/test/cxx11_tensor_contract_cuda.cpp -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/README.txt -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/bench Completed 'spotless' -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/bench/bench_svd.cpp -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/NumericalDiff -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/MoreVectorization -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/Polynomials -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/IterativeSolvers -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/Splines -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/SparseExtra -- 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/home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Polynomials -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Polynomials/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Polynomials/PolynomialUtils.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Polynomials/Companion.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Polynomials/PolynomialSolver.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/IterationController.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/DGMRES.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/GMRES.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/MINRES.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/IncompleteLU.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/IterativeSolvers/Scaling.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Splines -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Splines/Spline.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Splines/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Splines/SplineFitting.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Splines/SplineFwd.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/RandomSetter.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/MarketIO.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/BlockOfDynamicSparseMatrix.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/DynamicSparseMatrix.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/SparseExtra/BlockSparseMatrix.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/AutoDiff -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/AutoDiff/AutoDiffJacobian.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/AutoDiff/AutoDiffVector.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/AutoDiff/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/AutoDiff/AutoDiffScalar.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/FFT -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/FFT/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/FFT/ei_fftw_impl.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/FFT/ei_kissfft_impl.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/KroneckerProduct -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/KroneckerProduct/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/NonLinearOptimization -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/covar.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/r1updt.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/NonLinearOptimization/chkder.h -- Up-to-date: 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/home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineMatrix.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineProduct.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineInplaceLU.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineMatrixBase.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineUtil.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/Skyline/SkylineStorage.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/BVH -- Up-to-date: 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/home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMqrsolv.h -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/LevenbergMarquardt/LMonestep.h -- Installing: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/MatrixFunctions -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/MatrixFunctions/CMakeLists.txt -- Up-to-date: /home/mjhmilla/dev/drake/build/include/eigen3/unsupported/Eigen/src/MatrixFunctions/MatrixFuncti

rdeits commented 8 years ago

I think something has gone wrong with your build process. The fact that you had to change ../pod-build/drake_external_source_dirs.txt to ../drake_external_source_dirs.txt probably indicates that cmake is using the wrong folder for its build byproducts (it sounds like it's putting them directly into drake_ubuntu instead of drake_ubuntu/pod-build, and that's likely also why you had to do an additional make inside drake, and possibly why you're having problems with IRIS. We test the ubuntu installation process automatically through Travis (including IRIS), so I'm reasonably confident that it should work without modification.

So maybe the best thing to do is to go back to the beginning and try to find the root cause. Why did you have to remove drake from the install_prereqs.sh file?

And to fix your build, I think that a fresh clone of drake is likely to be the easiest thing to do. All you should need to do from that is cd into the cloned repo and do:

make options # and enable any extra packages you want to install
make download-all
sudo ./install_prereqs.sh ubuntu
make
mjhmilla commented 8 years ago

Thank you for the help!

I started with a fresh repo with the root folder name 'drake_ubuntu'. Everything is fine until 'sudo ./install_prereqs.sh ubuntu' which has the output

...build-essential is already the newest version. cmake is already the newest version. swig is already the newest version. openjdk-6-jdk is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded. install_prereqs could not find the list of external source directories.

Please run 'make download-all' first.

When I go and look at 'install_prereqs.sh' I see on line 23

SUBDIRS="drake externals" for subdir in $SUBDIRS; do if [ -f $subdir/install_prereqs.sh ]; then

...

but I don't see a directory called 'drake externals' in 'drake_ubuntu'. I only see 'externals'. Inside of 'externals' I see what looks like the '$subdir/install_prereqs.sh' that the script is trying to call. That's why I changed "drake externals" to "externals" earlier. When I did this earlier I ended up with everything working (as far as the examples are concerned) except for iris.

What should have I done?

Thanks again,

Matt

On Wed, Feb 24, 2016 at 6:44 PM, Robin Deits notifications@github.com wrote:

I think something has gone wrong with your build process. The fact that you had to change ../pod-build/drake_external_source_dirs.txt to ../drake_external_source_dirs.txt probably indicates that cmake is using the wrong folder for its build byproducts (it sounds like it's putting them directly into drake_ubuntu instead of drake_ubuntu/pod-build, and that's likely also why you had to do an additional make inside drake, and possibly why you're having problems with IRIS. We test the ubuntu installation process automatically through Travis (including IRIS), so I'm reasonably confident that it should work without modification.

So maybe the best thing to do is to go back to the beginning and try to find the root cause. Why did you have to remove drake from the install_prereqs.sh file?

And to fix your build, I think that a fresh clone of drake is likely to be the easiest thing to do. All you should need to do from that is cd into the cloned repo and do:

make options # and enable any extra packages you want to install make download-all sudo ./install_prereqs.sh ubuntu make

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188374466 .

mjhmilla commented 8 years ago

The error message I was seeing was coming from externals/install_prereqs.sh when this if statement fails:

if [ -e "../pod-build/drake_external_source_dirs.txt" ] then SUBDIRS=cat ../pod-build/drake_external_source_dirs.txt else echo "install_prereqs could not find the list of external source directories. Please run 'make download-all' first." 1>&2 exit 1

fi

and its failing because I don't have a folder called 'pod-build' in 'drake_ubuntu'.

Any idea why there's no 'pod-build' directory in 'drake-ubuntu'?

Thanks again!

Matt

On Wed, Feb 24, 2016 at 7:27 PM, Matthew Millard millard.matthew@gmail.com wrote:

Thank you for the help!

I started with a fresh repo with the root folder name 'drake_ubuntu'. Everything is fine until 'sudo ./install_prereqs.sh ubuntu' which has the output

...build-essential is already the newest version. cmake is already the newest version. swig is already the newest version. openjdk-6-jdk is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded. install_prereqs could not find the list of external source directories.

Please run 'make download-all' first.

When I go and look at 'install_prereqs.sh' I see on line 23

SUBDIRS="drake externals" for subdir in $SUBDIRS; do if [ -f $subdir/install_prereqs.sh ]; then

...

but I don't see a directory called 'drake externals' in 'drake_ubuntu'. I only see 'externals'. Inside of 'externals' I see what looks like the '$subdir/install_prereqs.sh' that the script is trying to call. That's why I changed "drake externals" to "externals" earlier. When I did this earlier I ended up with everything working (as far as the examples are concerned) except for iris.

What should have I done?

Thanks again,

Matt

On Wed, Feb 24, 2016 at 6:44 PM, Robin Deits notifications@github.com wrote:

I think something has gone wrong with your build process. The fact that you had to change ../pod-build/drake_external_source_dirs.txt to ../drake_external_source_dirs.txt probably indicates that cmake is using the wrong folder for its build byproducts (it sounds like it's putting them directly into drake_ubuntu instead of drake_ubuntu/pod-build, and that's likely also why you had to do an additional make inside drake, and possibly why you're having problems with IRIS. We test the ubuntu installation process automatically through Travis (including IRIS), so I'm reasonably confident that it should work without modification.

So maybe the best thing to do is to go back to the beginning and try to find the root cause. Why did you have to remove drake from the install_prereqs.sh file?

And to fix your build, I think that a fresh clone of drake is likely to be the easiest thing to do. All you should need to do from that is cd into the cloned repo and do:

make options # and enable any extra packages you want to install make download-all sudo ./install_prereqs.sh ubuntu make

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188374466 .

rdeits commented 8 years ago

Did you run make download-all?

mjhmilla commented 8 years ago

Yes

On Wed, Feb 24, 2016 at 7:36 PM, Robin Deits notifications@github.com wrote:

Did you run make download-all?

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188398382 .

mjhmilla commented 8 years ago

The command prompt output from running 'make download all' is attached, in case it helps. I see no mention of 'pod', or 'pod-build'.

Thanks again for the help - I really do appreciate it.

Matt

On Wed, Feb 24, 2016 at 7:40 PM, Matthew Millard millard.matthew@gmail.com wrote:

Yes

On Wed, Feb 24, 2016 at 7:36 PM, Robin Deits notifications@github.com wrote:

Did you run make download-all?

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188398382 .

-- CMAKE_INSTALL_PREFIX=/home/mjhmilla/dev/drake_ubuntu/build -- Preparing to build cmake with dependencies: -- Preparing to build textbook with dependencies: -- Preparing to build eigen with dependencies: -- Preparing to build lcm with dependencies: -- Preparing to build libbot with dependencies: lcm -- Preparing to build bullet with dependencies: -- Preparing to build spotless with dependencies: -- Preparing to build director with dependencies: lcm;libbot -- Preparing to build signalscope with dependencies: director -- Preparing to build octomap with dependencies: -- Preparing to build mosek with dependencies: -- Preparing to build iris with dependencies: eigen;mosek -- Preparing to build yalmip with dependencies: -- Preparing to build avl with dependencies: -- Preparing to build xfoil with dependencies: -- Preparing to build meshconverters with dependencies: -- Preparing to build swigmake with dependencies: -- Preparing to build swig_matlab with dependencies: -- Preparing to build drake with dependencies: cmake;eigen;lcm;libbot;bullet;octomap;swig_matlab;swigmake -- Installation will include extra example: LittleDog -- Preparing to install precompiled snopt -- Configuring done -- Generating done -- Build files have been written to: /home/mjhmilla/dev/drake_ubuntu [ 4%] Built target download-snopt-precompiled [ 4%] Performing update step for 'download-cmake' [ 6%] No configure step for 'download-cmake' [ 6%] No build step for 'download-cmake' [ 6%] No install step for 'download-cmake' [ 6%] Completed 'download-cmake' [ 8%] Built target download-cmake [ 8%] Performing update step for 'download-textbook' Your branch is up-to-date with 'origin/master'. [ 10%] No configure step for 'download-textbook' [ 10%] No build step for 'download-textbook' [ 10%] No install step for 'download-textbook' [ 12%] Completed 'download-textbook' [ 14%] Built target download-textbook [ 14%] Performing update step for 'download-libbot' [ 14%] No configure step for 'download-libbot' [ 14%] No build step for 'download-libbot' [ 14%] No install step for 'download-libbot' [ 14%] Completed 'download-libbot' [ 18%] Built target download-libbot [ 18%] Performing update step for 'download-eigen' [ 20%] No configure step for 'download-eigen' [ 20%] No build step for 'download-eigen' [ 20%] No install step for 'download-eigen' [ 22%] Completed 'download-eigen' [ 24%] Built target download-eigen [ 24%] Performing update step for 'download-octomap' [ 24%] No configure step for 'download-octomap' [ 24%] No build step for 'download-octomap' [ 26%] No install step for 'download-octomap' [ 26%] Completed 'download-octomap' [ 28%] Built target download-octomap [ 30%] Performing update step for 'download-bullet' [ 30%] No configure step for 'download-bullet' [ 32%] No build step for 'download-bullet' [ 32%] No install step for 'download-bullet' [ 34%] Completed 'download-bullet' [ 34%] Built target download-bullet [ 36%] Performing update step for 'download-spotless' [ 36%] No configure step for 'download-spotless' [ 38%] No build step for 'download-spotless' [ 38%] No install step for 'download-spotless' [ 40%] Completed 'download-spotless' [ 40%] Built target download-spotless [ 40%] Performing update step for 'download-lcm' [ 40%] No configure step for 'download-lcm' [ 42%] No build step for 'download-lcm' [ 42%] No install step for 'download-lcm' [ 44%] Completed 'download-lcm' [ 46%] Built target download-lcm [ 46%] Performing update step for 'download-mosek' [ 48%] No configure step for 'download-mosek' [ 48%] No build step for 'download-mosek' [ 48%] No install step for 'download-mosek' [ 48%] Completed 'download-mosek' [ 51%] Built target download-mosek [ 53%] Performing update step for 'download-director' [ 53%] No configure step for 'download-director' [ 53%] No build step for 'download-director' [ 55%] No install step for 'download-director' [ 55%] Completed 'download-director' [ 55%] Built target download-director [ 55%] Performing update step for 'download-signalscope' [ 55%] No configure step for 'download-signalscope' [ 57%] No build step for 'download-signalscope' [ 57%] No install step for 'download-signalscope' [ 59%] Completed 'download-signalscope' [ 61%] Built target download-signalscope [ 61%] Performing update step for 'download-avl' [ 61%] No configure step for 'download-avl' [ 61%] No build step for 'download-avl' [ 61%] No install step for 'download-avl' [ 61%] Completed 'download-avl' [ 65%] Built target download-avl [ 65%] Performing update step for 'download-yalmip' [ 65%] No configure step for 'download-yalmip' [ 67%] No build step for 'download-yalmip' [ 67%] No install step for 'download-yalmip' [ 69%] Completed 'download-yalmip' [ 71%] Built target download-yalmip [ 71%] Performing update step for 'download-iris' [ 71%] No configure step for 'download-iris' [ 71%] No build step for 'download-iris' [ 71%] No install step for 'download-iris' [ 71%] Completed 'download-iris' [ 75%] Built target download-iris [ 77%] Performing update step for 'download-meshconverters' [ 77%] No configure step for 'download-meshconverters' [ 79%] No build step for 'download-meshconverters' [ 81%] No install step for 'download-meshconverters' [ 81%] Completed 'download-meshconverters' [ 81%] Built target download-meshconverters [ 81%] Performing update step for 'download-xfoil' [ 81%] No configure step for 'download-xfoil' [ 81%] No build step for 'download-xfoil' [ 81%] No install step for 'download-xfoil' [ 81%] Completed 'download-xfoil' [ 85%] Built target download-xfoil [ 87%] Performing update step for 'download-swigmake' [ 87%] No configure step for 'download-swigmake' [ 87%] No build step for 'download-swigmake' [ 89%] No install step for 'download-swigmake' [ 89%] Completed 'download-swigmake' [ 89%] Built target download-swigmake [ 89%] Performing update step for 'download-swig_matlab' [ 91%] No configure step for 'download-swig_matlab' [ 91%] No build step for 'download-swig_matlab' [ 91%] No install step for 'download-swig_matlab' [ 91%] Completed 'download-swig_matlab' [ 93%] Built target download-swig_matlab [ 93%] Performing update step for 'download-LittleDog' [ 93%] No configure step for 'download-LittleDog' [ 95%] No build step for 'download-LittleDog' [ 95%] No install step for 'download-LittleDog' [ 97%] Completed 'download-LittleDog' [100%] Built target download-LittleDog [100%] Built target download-all

rdeits commented 8 years ago

Ah, okay. This looks like the output of make download-all after it's already been run at least once. So whatever strange mis-configuration of the build system is still present. It will help me a lot if you can try again from a clean clone of drake. Can you please try the following?

git clone https://github.com/RobotLocomotion/drake.git drake-clean
cd drake-clean
mkdir build
make options
make download-all

and see if that results in the pod-build folder being created?

If it does, then you should be able to run ./install_prereqs.sh ubuntu and have it run without errors.

mjhmilla commented 8 years ago

Problem found, and I'm it. When I saw this instruction:

make options # use the gui to choose which externals you ...

I thought 'don't they mean ccmake?'. And so I ran ccmake and this skipped script in 'make options' you've written to make the directory pod-build. I've never run 'make options' before and that's why I switched over to ccmake without thinking about it. Three times. Everything is installing right now, and I expect it will work just fine.

Thank you for your patience,

Matt

On Wed, Feb 24, 2016 at 8:29 PM, Robin Deits notifications@github.com wrote:

Ah, okay. This looks like the output of make download-all after it's already been run at least once. So whatever strange mis-configuration of the build system is still present. It will help me a lot if you can try again from a clean clone of drake. Can you please try the following?

git clone https://github.com/RobotLocomotion/drake.git drake-clean cd drake-clean mkdir build make options make download-all

and see if that results in the pod-build folder being created?

If it does, then you should be able to run ./install_prereqs.sh ubuntu and have it run without errors.

— Reply to this email directly or view it on GitHub https://github.com/RobotLocomotion/drake/issues/1745#issuecomment-188418933 .

rdeits commented 8 years ago

Okay, that makes sense. I'm glad you figured it out!