Roestlab / massdash

MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization

https://massdash.streamlit.app/

BSD 3-Clause "New" or "Revised" License

18 stars 3 forks source link

update for pyopenms 3.2.0 #138

Closed jcharkow closed 1 month ago

jcharkow commented 1 month ago

Description

rename PeakPickerMRM to PeakPickerChromatogram (pyOpenMS 3.2 update)
Deprecate the requirements.txt, have everything in the .toml file
Add different ways to install to .toml file including separating out the GUI dependencies from the other dependencies.
Update plotting test snapshot (for plotly) to be consistent with new version

Contents (#138)

Other

exclude plotly tests on mac
fix: another bug
test: another bug
update peak picker docs

Uncategorised!

update for pyopenms==3.2.0
temp remove mac tests
add mac test back for testing
remove all tests from mac
fix bug in pytest mark
test windows
update ci.yml
update ci.yml
use .toml instead of requirements
update pyprject
update pyproject
remove streamlit dependency transitionPQPDataAccess
updates to pyprophet.toml
remove streamlit dependency from non gui elements
add back all os and python versions