RosettaCommons / RoseTTAFold

This package contains deep learning models and related scripts for RoseTTAFold
MIT License
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How to find some introductions about these packages? #121

Closed HectorTo closed 2 years ago

HectorTo commented 2 years ago

Thanks for sharing Rosetta here! There are many executable binaries in this fold"bin" downloaded, to use these, do I need different orders for each?How to find them? eg. package like relax.static.linuxgccrelease ,to use it, I must set -nstruct 2 -relax:default_repeats 25 -out:path:pdb . -out:path:score .

so what about others?

roccomoretti commented 2 years ago

This repo is not Rosetta, the protein modeling package that's been around for several decades, but rather RoseTTAFold, the protein structure prediction neural-network published in 2021 (Baek et al. "Accurate prediction of protein structures and interactions using a three-track neural network" https://doi.org/10.1126/science.abj8754)

For "regular" Rosetta (the one with relax.static.linuxgccrelease), please see https://www.rosettacommons.org/ For the documentation, https://www.rosettacommons.org/docs/latest/ and if you have additional questions https://www.rosettacommons.org/forum

HectorTo commented 2 years ago

thanks a lot