search

RosettaCommons / RoseTTAFold

This package contains deep learning models and related scripts for RoseTTAFold
MIT License
2.03k stars 440 forks source link

Cuda11 compatibility #138

Open rmarabini opened 1 year ago

rmarabini commented 1 year ago

Hi,

I installed Rosettafold and I was able to run the example script called "run_e2e_ver.sh" , after that I try to execute "run_pyrosetta_ver.sh" but it failed when executing the command

python $PIPEDIR/DAN-msa/ErrorPredictorMSA.py --roll -p $CPU $WDIR/t000_.3track.npz $WDIR/pdb-3track $WDIR/pdb-3track 1> $WDIR/log/DAN_msa.stdout

The reported error is

While processing ./pdb-3track/model0_2_0.25.features.npz: 'pyrosetta.rosetta.utility.graph.EdgeListConstItera' object has no attribute 'mul'

this error repeats for each file named model0_X_0.YY. The pdb files (model0_X_0.YY.pdb) at directory $WDIR/pdb-3trac seem to be OK.

any suggestion will be welcomed

sberneche commented 1 year ago

Hi, did you manage to solve the issue? I just now have the same problem. Thanks in advance.

rmarabini commented 1 year ago

No, I did not :-(