update documentation and remove deprecated scripts

[lyskov]

• add documentation and link to RosettaCommons DockerHub
• add reference Docker images
• remove deprecated Conda scripts
• remove deprecated PyRosetta build options
• update PyRosetta readme

[smoe]

Nice!

[boseong-Jeong]

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Re: [RosettaCommons/rosetta] update documentation and remove deprecated scripts (PR #41)

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[lyskov]

Thank you for review @roccomoretti !