antibody.py: cut of second half of light chain was too early

RosettaCommons / tools

Tools for parsing Rosetta source code and scripts for running specific Rosetta applications.

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antibody.py: cut of second half of light chain was too early #13

Closed smoe closed 9 years ago

smoe commented 9 years ago

The length of the sequence causing an issue was 132. The "50+75" would exceed the length of the sequence length for lengths between 121 and 124. It should hence be ">125". Now, finding a motif so late in the sequence, the 5 should be added to both what is after the ">" and what comes after the "`+".

nmarze commented 9 years ago

Just got a chance to look at this; I don't think this change will cause any problems. Certainly, it will prevent any array overflow for the 121-124 case, and the L1 & L3 will still safely be in the ranges in both cases.