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Rostlab / SeqVec

Modelling the Language of Life - Deep Learning Protein Sequences
http://embed.protein.properties
MIT License
116 stars 13 forks source link

Install error #11

Closed pkerpedjiev closed 4 years ago

pkerpedjiev commented 4 years ago

Hey, thanks for making this package available! I'm excited to try it out but am getting this error when trying to install using pip:

(cenv4) pkerpedjiev$ pip install seqvec
Collecting seqvec
  Downloading seqvec-0.2.0-py3-none-any.whl (10 kB)
ERROR: Could not find a version that satisfies the requirement torch<1.3,>=1.2 (from seqvec) (from versions: 0.1.2, 0.1.2.post1, 0.1.2.post2, 1.4.0)
ERROR: No matching distribution found for torch<1.3,>=1.2 (from seqvec)

Any suggestions?

mheinzinger commented 4 years ago

Hey,

I tried to reproduce your error with a new conda-environment using Python 3.7.6, GCC 7.3.0, CUDA 10.2 (Driver Version: 440.64) but the installation worked without problems. For me, pytorch 1.2 was installed automatically. Maybe you need to install this specific pytorch version manually [something like: pip install torch==1.2.0], before installing seqvec.

Best, Michael

konstin commented 4 years ago

Could you please paste the output of pip debug --verbose?

pkerpedjiev commented 4 years ago

Thanks for the quick response!

Here's the output of pip debug --verbose:

out.txt

Maybe it's because I'm using Python 3.8? I got it to run by creating a fresh conda environment with Python 3.7.

mheinzinger commented 4 years ago

The version conflict should be resolved with the latest updates. I'll also add a short note on this to the readme.