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Roth-Lab / pyclone

Probabilistic model for inferring clonal population structure from deep NGS sequencing.
https://bitbucket.org/aroth85/pyclone/wiki/Home
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ImportError: No module named cli #16

Open dawe opened 4 years ago

dawe commented 4 years ago

Hi, I have installed PyClone following instructions, through miniconda. Apparently it doesn't start as it cannot load properly subpackages:

$ PyClone 
Traceback (most recent call last):
  File "/home/dcittaro/miniconda3/envs/pyclone2/bin/PyClone", line 11, in <module>
    load_entry_point('PyClone==0.13.1', 'console_scripts', 'PyClone')()
  File "/home/dcittaro/miniconda3/envs/pyclone2/lib/python2.7/site-packages/pkg_resources/__init__.py", line 489, in load_entry_point
    return get_distribution(dist).load_entry_point(group, name)
  File "/home/dcittaro/miniconda3/envs/pyclone2/lib/python2.7/site-packages/pkg_resources/__init__.py", line 2852, in load_entry_point
    return ep.load()
  File "/home/dcittaro/miniconda3/envs/pyclone2/lib/python2.7/site-packages/pkg_resources/__init__.py", line 2443, in load
    return self.resolve()
  File "/home/dcittaro/miniconda3/envs/pyclone2/lib/python2.7/site-packages/pkg_resources/__init__.py", line 2449, in resolve
    module = __import__(self.module_name, fromlist=['__name__'], level=0)
ImportError: No module named cli

Has anybody experienced something similar?

xiasijian commented 1 year ago

image

The same error for me, how do you slove it?