issues
search
Rothamsted
/
knetbuilder
KnetBuilder data integration platform for building knowledge graphs. Previously known as ondex.
https://knetminer.com
MIT License
12
stars
11
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Bump org.apache.xmlgraphics:batik-bridge from 1.7 to 1.17 in /ondex-desktop/ovtk2
#75
dependabot[bot]
opened
1 year ago
0
Bump org.apache.xmlgraphics:batik-transcoder from 1.7 to 1.17 in /ondex-desktop/ovtk2
#74
dependabot[bot]
opened
1 year ago
0
Tabular parser sets concept name preferred flag to false
#73
KeywanHP
closed
1 year ago
0
Bump hazelcast from 5.1 to 5.1.3 in /ondex-opt/core-opt/memory-dist
#72
dependabot[bot]
closed
1 year ago
3
GAF parser review and enhancement
#71
KeywanHP
opened
2 years ago
0
Cytoscape/JSON exporter, abbreviated concept names clash with colour highlights
#70
marco-brandizi
closed
2 years ago
1
Bump jsoup from 1.14.2 to 1.15.3
#69
dependabot[bot]
closed
1 year ago
2
Bump plexus-utils from 1.1 to 3.0.16 in /ondex-knet-builder/ondex-mini
#68
dependabot[bot]
closed
1 year ago
2
Bump fop from 0.95 to 2.2 in /ondex-desktop/ovtk2
#67
dependabot[bot]
opened
2 years ago
2
CytoscapeJS plugin, add option to export pure-JSON
#66
marco-brandizi
closed
2 years ago
3
Extend tmbased plugin with words to exclude from search
#65
KeywanHP
closed
2 years ago
6
Migration to Java 17
#64
marco-brandizi
opened
2 years ago
3
Migrate to Log4j 2 using the 1/2 bridge.
#63
marco-brandizi
opened
2 years ago
0
Remove dependabot warnings about Apache Axis
#62
marco-brandizi
closed
1 year ago
1
Labels in the CytoscapeJS plug-in should be the same used in the rest of KnetMiner
#61
marco-brandizi
closed
2 years ago
0
Bump xstream from 1.4.18 to 1.4.19
#60
dependabot[bot]
closed
2 years ago
2
Bump commons-beanutils from 1.9.3 to 1.9.4 in /ondex-knet-builder/modules/rdf2oxl
#59
dependabot[bot]
closed
2 years ago
2
Bump hazelcast from 2.3.1 to 4.0.5 in /ondex-opt/core-opt/memory-dist
#58
dependabot[bot]
closed
2 years ago
1
Bump mysql-connector-java from 5.1.6 to 8.0.16 in /ondex-opt/core-opt/sql
#57
dependabot[bot]
closed
2 years ago
1
Bump xercesImpl from 2.12.1 to 2.12.2
#56
dependabot[bot]
closed
2 years ago
2
Specification for an offline Graph Traverser and Semantic Motif Initialiser
#55
marco-brandizi
closed
1 year ago
9
how can I acquire the specific dataset (e.g rice) of KnetMiner ？
#54
Cyviva
closed
2 years ago
3
LuceneEnv, concept/relation queries that fetch internal metadata too
#53
marco-brandizi
closed
2 years ago
2
Bump lucene-core from 6.6.0 to 7.1.0
#52
dependabot[bot]
opened
3 years ago
0
Error: org/apache/log4j/PropertyConfigurator
#51
ArpitGaurTools
closed
2 years ago
4
The tab parser seems to have collapsed concepts that have not identical accessions
#50
marco-brandizi
closed
2 years ago
3
Bump xstream from 1.4.17 to 1.4.18
#49
dependabot[bot]
closed
3 years ago
2
Bump jsoup from 1.8.3 to 1.14.2
#48
dependabot[bot]
closed
3 years ago
2
The Text Mining plug-in doesn't find unix4j anymore (was: PubMed efetch parsing problem?)
#47
jparsons2222
closed
2 years ago
1
Bump guava from 28.1-jre to 29.0-jre
#46
dependabot[bot]
closed
3 years ago
1
Biocyc parser exception with aracyc biopax-level2.owl
#45
KeywanHP
closed
3 years ago
3
Bump xstream from 1.4.16 to 1.4.17
#44
dependabot[bot]
closed
3 years ago
1
Bump commons-io from 2.5 to 2.7
#43
dependabot[bot]
closed
3 years ago
1
NullPointerException when searching for a particular set of terms
#42
marco-brandizi
closed
3 years ago
1
Parsing co_321.owl throws an error
#41
KeywanHP
closed
2 years ago
5
Bump lucene.version from 6.6.0 to 8.8.1
#40
dependabot[bot]
closed
3 years ago
1
Bump xstream from 1.4.11.1 to 1.4.15
#39
dependabot[bot]
closed
3 years ago
1
Bump xstream from 1.4.11.1 to 1.4.13-java7
#38
dependabot[bot]
closed
3 years ago
1
Bump xercesImpl from 2.11.0 to 2.12.0
#37
dependabot[bot]
closed
3 years ago
1
Use of semanticmotifs?
#36
man4ish
closed
3 years ago
1
Issues with custom data
#35
man4ish
closed
3 years ago
9
Tutorial doesn't work with the latest master version (based on Java 11)
#34
marco-brandizi
closed
3 years ago
1
Knetbuilder is working not working for 3.0 while it is working for 1.2
#33
man4ish
closed
4 years ago
9
Bump junit from 3.8.1 to 4.13.1 in /ondex-desktop/ovtk2-modules/collapserPlugin
#32
dependabot[bot]
closed
3 years ago
9
TAB Parser behaviour for blank entries in a column
#31
KeywanHP
closed
2 years ago
5
Accesion based mapper fails with OutOfMemoryError
#30
josephhearnshaw
closed
3 years ago
2
Accession based mapper fails with NullPointerException
#29
josephhearnshaw
closed
3 years ago
1
Bump xstream from 1.3.1 to 1.4.10-java7 in /ondex-base/core/marshal
#28
dependabot[bot]
closed
4 years ago
1
Bump xercesImpl from 2.9.1 to 2.12.0 in /ondex-base/core/workflow-base
#27
dependabot[bot]
closed
4 years ago
1
Bump xercesImpl from 2.11.0 to 2.12.0 in /modules/scripting
#26
dependabot[bot]
closed
3 years ago
14
Next