Make VirMake compliant with the standards of the Snakemake Workflow Catalog

Rounge-lab / VirMake

VirMake is a Snakemake based pipeline that offers viral metagenic data analysis on paired-end data. It offers taxonomic and functional annotation, supports offline running and support for HPC cluster execution. It is made for Linux based systems and has been tested on SLURM cluster execution.

GNU General Public License v3.0

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Make VirMake compliant with the standards of the Snakemake Workflow Catalog #16

Open torognes opened 7 months ago

torognes commented 7 months ago

Make VirMake compliant with the standards of the Snakemake Workflow Catalog and its Standardized usage rules.

torognes commented 7 months ago

There is also a description of the recommended repository directory structure here:

https://snakemake.readthedocs.io/en/stable/snakefiles/deployment.html

torognes commented 7 months ago

We just need to do the following:

provide configuration instructions under config/README.md
contain a YAML file .snakemake-workflow-catalog.yml in their root directory, which configures the usage instructions displayed by this workflow catalog