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Roy-lab / scMTNI

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prior network bed format #7

Closed shalberg closed 12 months ago

shalberg commented 1 year ago

The prior network function mapMot2Gene.py needs a specific bed format for the peak2gene intersect file mot2peak (e.g. peak2gene file column 4 needs to be a unique peak identifier). The file format specifications are not provided in the documentation.

shiluzhang commented 1 year ago

Hi Spencer, thanks for the comments. I have updated the example bed format required by mapMot2Gene.py in https://github.com/Roy-lab/scMTNI/blob/master/Scripts/genPriorNetwork/readme.md. Please let me know if you have other issues with the scripts.