RuleWorld / bionetgen

Rule-based modeling framework
https://bionetgen.org/
MIT License
59 stars 25 forks source link

Perform multiple stochastic runs and generate statistics #193

Open jrfaeder opened 6 years ago

jrfaeder commented 6 years ago

Propose to add parameter "n_repeat", then run the number of trajectories, possibly in parallel. When all are complete, a processing script will run to compute means and variances of the observables at the output time points. Options for output files include: 1) Putting the means and variances for each observable in separate files. 2) Making one file for each observable that reports mean and variance.

wshlavacek commented 6 years ago

This would be a most excellent feature!

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On Dec 22, 2017, at 12:59 PM, jrfaeder notifications@github.com wrote:

Propose to add parameter "n_repeat", then run the number of trajectories, possibly in parallel. When all are complete, a processing script will run to compute means and variances of the observables at the output time points. Options for output files include:

Putting the means and variances for each observable in separate files. Making one file for each observable that reports mean and variance. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.