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RuleWorld / rulebender

Rule-Based Modeling and Simulation Gui
http://bionetgen.org
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MatchOnce attribute being interpreted as part of the molecule name in Species Graph viewer #136

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago 
In the Species Graph tab, when viewing observable patterns such as

    {MatchOnce}A(b!1,b!2,b!3).B(a!1).B(a!2).B(a!3)

RB is interpreting {MatchOnce} as being part of the name for molecule A. In 
this case it displays three molecules labeled B and one labeled {MatchOnce}A.

The '{MatchOnce}' string should be removed from the molecule name. I don't 
think it's necessary to display the MatchOnce attribute in the Species Graph 
viewer but I'm not sure.

Attached is the model containing this observable.

Original issue reported on code.google.com by lh64@cornell.edu on 27 Mar 2013 at 8:53

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GoogleCodeExporter commented 9 years ago

Original comment by lh64@cornell.edu on 27 Mar 2013 at 9:27