search

Russel88 / CRISPRCasTyper

CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
https://typer.crispr.dk
MIT License
89 stars 16 forks source link

alternative to minced? #17

Open ltcall opened 3 years ago

ltcall commented 3 years ago

Thanks for the great tool!

In some cases it might be nice to be able to use CRISPR repeat/spacer arrays identified using a different tool or identified previously. For example we could pass a gff with array coordinates.

Russel88 commented 2 years ago

Dear ltcall

I'm glad you like the tool! I have thought about implementing a more flexible approach for CRISPR prediction, but it will probably take some time before I have time to implement it.