Closed TianyiChang closed 1 year ago
Hi TianyiChang
It looks like a bug that appears when no repeat matches any sequences in the input. You can get around it by adding the --skip_blast argument when running cctyper. I will fix it in the next version.
Thank you for reporting!
I see. Thanks a lot!
On Aug 19 2022, at 6:25 AM, Jakob Russel @.***> wrote:
Hi TianyiChang
It looks like a bug that appears when no repeat matches any sequences in the input. You can get around it by adding the --skip_blast argument when running cctyper. I will fix it in the next version.
Thank you for reporting!
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Hi TianyiChang
I cannot reproduce that error. On my system a blast.tab file is always produced, even without matches. Can you provide information on the version of cctyper and dependecies, and maybe a small example file which produce an error
Best, Jakob
Hi there
I was wondering if you know what caused this issue, "FileNotFoundError: [Errno 2] No such file or directory: DIR/blast.tab"?
Thanks!