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Russel88 / CRISPRCasTyper

CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
https://typer.crispr.dk
MIT License
94 stars 17 forks source link

Impossible to obtain results with CrisprCasTyper #56

Open Nabila44300 opened 2 months ago

Nabila44300 commented 2 months ago

Hello

In July I succeded in obtaining results of CRISPR Cas identification with several metagenomes however today I was not able any results whatever the sequences that I used, time was running without success. Could you please help me? many thanks Nabila

Russel88 commented 2 months ago

Hi I need some more information to able to help. Are you using the webserver or a local installation. If you use a local installation, what version have you installed? Did you run it with the same options/installation in July as you did today? Do you see any errors/warnings or is the program running to completion just with empty results? Do you have any example data that has previously worked, but is not working now.

Nabila44300 commented 2 months ago

Hello Many thanks for your replay. I am using the web version, and the default parameters. I have used new sequences to detect Cas and CRISPR sequences, however the time was running but never stop. So I have tried with the sequences that I have alteady analysed in July and I obtained the same results. I do not understand...

Nabila44300 commented 2 months ago

"The same results" meaning the time is running and never stop. But I did not receive the same results that in July

Russel88 commented 2 months ago

Do you have a job ID?

Nabila44300 commented 2 months ago

yes for example the Job ID: 94k3k3kf8x

 Le mardi 17 septembre 2024 à 11:13:21 UTC+2, Jakob Russel ***@***.***> a écrit :

Do you have a jobid?

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

Russel88 commented 2 months ago

I can see that job has finished, but hasn't found any CRISPR-cas operons: https://crisprcastyper.crispr.dk/#/jobs/94k3k3kf8x