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Russel88 / MAGinator

MAGinator - Accurate SNV calling and profiling of MAGs
MIT License
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Avoid rerunning of of rule to produce BAM-files #6

Open trinezac opened 1 year ago

trinezac commented 1 year ago

In MAGinator/maginator/workflow/pileup.Snakefile'


Change the too ancient to not rerun every time? bam=os.path.join(WD, 'mapped_reads', 'bams', 'genecounts{sample}.bam')

Currently it reruns every time with the message: 'Params have changed since last execution'