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SABS-R3-projects / Paint4Brains

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
https://www.sabsr3.ox.ac.uk/software-projects
BSD 3-Clause "New" or "Revised" License
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Problems installing nn_common_modules dependency #47

Closed AndreiRoibu closed 4 years ago

AndreiRoibu commented 4 years ago

Describe the bug When running setup.sh or setup.py, pip throws an error saying that the url was not found.

To Reproduce Steps to reproduce the behavior:

  1. Git clone master into a clean folder
  2. run from terminal: ./setup.sh

Expected behavior I would expect a clean setup, but I am getting this error. I remember we changed some things a few weeks ago, but I remember it was performing a clean install.

Screenshots Screenshot attached: Screenshot from 2020-03-18 14-39-54

Desktop (please complete the following information):

Additional context We would also need to updat the readme if the installation process is different now.

AndreiRoibu commented 4 years ago

Fixed problem by upgrading pip inside setup.py