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SACGF / variantgrid

VariantGrid public repo
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Setting to reject symbolic variants #1114

Open davmlaw opened 1 month ago

davmlaw commented 1 month ago

Can reject in vcf_clean_and_filter

davmlaw commented 1 month ago

@TheMadBug - 3510193ff7819b73ac46ffd5a1a313573e4563a6 needs to be patched into shariant prod branch

This should just break everything really loudly if symbolics are ever used

davmlaw commented 1 month ago

@TheMadBug I made it throw an exception if a symbolic VariantCoordinate is ever instantiated

This may be too much and break migrations etc, so can just remove pedantic validation there

Reason was it left some imports hanging if you strip everything out if VCF will fix that monday