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SACGF / variantgrid

VariantGrid public repo
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UploadPipeline 7932 failed. Filename: Clinvar Error: UploadedFile has no uploadedclinvarversion. #930

Closed TheMadBug closed 10 months ago

TheMadBug commented 1 year ago

View details in Rollbar: https://app.rollbar.com/a/jimmy.andrews/fix/item/VariantGrid/4630

UploadPipeline 7933 failed. Filename: Clinvar Error: UploadedFile has no uploadedclinvarversion.
TheMadBug commented 1 year ago

Importing the same GRCh38 ClinVar annotations VCF twice caused this error and resulted in the ClinVar annotations not being recognised within VariantGrid. Subsequent imports just resulted in the same error.

To solve I had to manually delete the latest UploadedClinVarVersion and then the next run worked fine.

I'm unsure how repeatable this issue is as I've only caused it once and I'm in no great hurry to try it again.

davmlaw commented 1 year ago

I made it so you can upload the same clinvar file twice

davmlaw commented 10 months ago

No further issues reported, closing as fixed