aronchick
commented
2 years ago Can you describe the debugging steps you went through here? For example, just before the dashes, it says "gcc" is not installed. What happens when you install it?
Closed js-ts closed 2 years ago
aronchick
commented
2 years ago Can you describe the debugging steps you went through here? For example, just before the dashes, it says "gcc" is not installed. What happens when you install it?
aronchick
commented
2 years ago We need a bunch more repro steps here - what environment were you in? how did you try to install? etc
aronchick
commented
2 years ago Can you also upload the entire log? Not just this - we need what happened before this.
` Building wheels for collected packages: Cerberus, cytoolz, kfp Building wheel for Cerberus (PEP 517) ... done Created wheel for Cerberus: filename=Cerberus-1.3.4-py3-none-any.whl size=58196 sha256=f810522c4486f42fd1fde9eb07d8de0bf44858780f09518aec71f9cabd5bc190 Stored in directory: /home/jovyan/.cache/pip/wheels/92/1e/40/307520b5eb38ceae17d32d7d7920e3e5eee6f4cd78cfd75ac7 Building wheel for cytoolz (setup.py) ... error ERROR: Command errored out with exit status 1: command: /opt/conda/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"'; file='"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-21qby8sh cwd: /tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/ Complete output (57 lines): [1/5] Cythonizing cytoolz/utils.pyx [2/5] Cythonizing cytoolz/dicttoolz.pyx [3/5] Cythonizing cytoolz/functoolz.pyx [4/5] Cythonizing cytoolz/itertoolz.pyx [5/5] Cythonizing cytoolz/recipes.pyx running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/init.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/_signatures.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/_version.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/compatibility.py -> build/lib.linux-x86_64-3.8/cytoolz creating build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/init.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/exceptions.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/operator.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/utils.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/functoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/dicttoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/recipes.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/itertoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/recipes.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/itertoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/dicttoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/cpython.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/functoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/utils.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/init.pxd -> build/lib.linux-x86_64-3.8/cytoolz creating build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_embedded_sigs.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_dev_skip_test.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_docstrings.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_inspect_args.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_functoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_serialization.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_none_safe.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_compatibility.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_signatures.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_recipes.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/dev_skip_test.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_tlz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_doctests.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_dicttoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_curried_toolzlike.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_utils.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_curried.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_itertoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests running build_ext building 'cytoolz.dicttoolz' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/cytoolz gcc -pthread -B /opt/conda/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/opt/conda/include/python3.8 -c cytoolz/dicttoolz.c -o build/temp.linux-x86_64-3.8/cytoolz/dicttoolz.o unable to execute 'gcc': No such file or directory error: command 'gcc' failed with exit status 1
ERROR: Failed building wheel for cytoolz Running setup.py clean for cytoolz Building wheel for kfp (setup.py) ... done Created wheel for kfp: filename=kfp-1.8.12-py3-none-any.whl size=419051 sha256=2a01890e58c91c866baeee88594b02a79e738bafec0f53f83d70ecb605f866fb Stored in directory: /home/jovyan/.cache/pip/wheels/98/fb/f1/59e0d57d91d3962c874739f5d1c9fa66526b67c24805d034e6 Successfully built Cerberus kfp Failed to build cytoolz Installing collected packages: pyzmq, python-dateutil, nest-asyncio, jupyter-core, jupyter-client, charset-normalizer, requests, mdurl, typing-extensions, qtpy, markdown-it-py, wimpy, typer, toml, structlog, ruamel.yaml.clib, qtconsole, pydantic, pkginfo, oyaml, mdit-py-plugins, kubernetes, kfp-pipeline-spec, jupyter-console, distlib, cloudpickle, anytree, tblib, ruamel.yaml, regex, python-box, pandas, metakernel, kfp, jupytext, jupyter, johnnydep, cytoolz, Cerberus, sameproject Attempting uninstall: pyzmq Found existing installation: pyzmq 22.1.0 Uninstalling pyzmq-22.1.0: Successfully uninstalled pyzmq-22.1.0 Attempting uninstall: python-dateutil Found existing installation: python-dateutil 2.8.1 Uninstalling python-dateutil-2.8.1: Successfully uninstalled python-dateutil-2.8.1 Attempting uninstall: nest-asyncio Found existing installation: nest-asyncio 1.5.1 Uninstalling nest-asyncio-1.5.1: Successfully uninstalled nest-asyncio-1.5.1 Attempting uninstall: jupyter-core Found existing installation: jupyter-core 4.7.1 Uninstalling jupyter-core-4.7.1: Successfully uninstalled jupyter-core-4.7.1 Attempting uninstall: jupyter-client Found existing installation: jupyter-client 6.1.12 Uninstalling jupyter-client-6.1.12: Successfully uninstalled jupyter-client-6.1.12 Attempting uninstall: requests Found existing installation: requests 2.25.1 Uninstalling requests-2.25.1: Successfully uninstalled requests-2.25.1 Attempting uninstall: typing-extensions Found existing installation: typing-extensions 4.0.1 Uninstalling typing-extensions-4.0.1: Successfully uninstalled typing-extensions-4.0.1 Attempting uninstall: kubernetes Found existing installation: kubernetes 12.0.1 Uninstalling kubernetes-12.0.1: Successfully uninstalled kubernetes-12.0.1 Attempting uninstall: kfp-pipeline-spec Found existing installation: kfp-pipeline-spec 0.1.13 Uninstalling kfp-pipeline-spec-0.1.13: Successfully uninstalled kfp-pipeline-spec-0.1.13 Attempting uninstall: cloudpickle Found existing installation: cloudpickle 1.6.0 Uninstalling cloudpickle-1.6.0: Successfully uninstalled cloudpickle-1.6.0 Attempting uninstall: pandas Found existing installation: pandas 1.2.4 Uninstalling pandas-1.2.4: Successfully uninstalled pandas-1.2.4 Attempting uninstall: kfp Found existing installation: kfp 1.6.3 Uninstalling kfp-1.6.3: Successfully uninstalled kfp-1.6.3 Running setup.py install for cytoolz ... error ERROR: Command errored out with exit status 1: command: /opt/conda/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"'; file='"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-og9a9po7/install-record.txt --single-version-externally-managed --compile --install-headers /opt/conda/include/python3.8/cytoolz cwd: /tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/ Complete output (57 lines): [1/5] Cythonizing cytoolz/utils.pyx [2/5] Cythonizing cytoolz/dicttoolz.pyx [3/5] Cythonizing cytoolz/functoolz.pyx [4/5] Cythonizing cytoolz/itertoolz.pyx [5/5] Cythonizing cytoolz/recipes.pyx running install running build running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/init.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/_signatures.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/_version.py -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/compatibility.py -> build/lib.linux-x86_64-3.8/cytoolz creating build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/init.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/exceptions.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/curried/operator.py -> build/lib.linux-x86_64-3.8/cytoolz/curried copying cytoolz/utils.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/functoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/dicttoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/recipes.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/itertoolz.pyx -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/recipes.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/itertoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/dicttoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/cpython.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/functoolz.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/utils.pxd -> build/lib.linux-x86_64-3.8/cytoolz copying cytoolz/init.pxd -> build/lib.linux-x86_64-3.8/cytoolz creating build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_embedded_sigs.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_dev_skip_test.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_docstrings.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_inspect_args.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_functoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_serialization.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_none_safe.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_compatibility.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_signatures.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_recipes.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/dev_skip_test.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_tlz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_doctests.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_dicttoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_curried_toolzlike.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_utils.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_curried.py -> build/lib.linux-x86_64-3.8/cytoolz/tests copying cytoolz/tests/test_itertoolz.py -> build/lib.linux-x86_64-3.8/cytoolz/tests running build_ext building 'cytoolz.dicttoolz' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/cytoolz gcc -pthread -B /opt/conda/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/opt/conda/include/python3.8 -c cytoolz/dicttoolz.c -o build/temp.linux-x86_64-3.8/cytoolz/dicttoolz.o unable to execute 'gcc': No such file or directory error: command 'gcc' failed with exit status 1
ERROR: Command errored out with exit status 1: /opt/conda/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"'; file='"'"'/tmp/pip-install-20xt5gml/cytoolz_66c323df82ff4dc28e4c1e79524db6b1/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-og9a9po7/install-record.txt --single-version-externally-managed --compile --install-headers /opt/conda/include/python3.8/cytoolz Check the logs for full command output. (base) jovyan@same-test-0:~$ python --version Python 3.8.10 `