Create visual overview of reads per gene.

SATAY-LL / LaanLab-SATAY-DataAnalysis

This contains codes and workflows for data analysis regarding SATAY experiments.

Apache License 2.0

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Create visual overview of reads per gene. #6

Closed Gregory94 closed 4 years ago

Gregory94 commented 4 years ago

Create several visualizations for creating an overview of the transposon insertion location and the number of reads. Current progress is primarily in the gene_reads.py file which includes:

A bar plot that counts the number of reads per region in the gene.
A graph where the distribution of the distance between subsequent insertions is shown and compared with the distribution for the entire chromosome.

Read_ProfilePlot_bem1

leilaicruz commented 4 years ago

Can you put here also the visualizations you got? we can use this issue to discuss what you found :)