Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms

SATAY-LL / SATAY-DOWNSTREAM-ANALYSIS

This repo contains some downstream analysis for satay data.

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Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms #16

Open leilaicruz opened 3 years ago

leilaicruz commented 3 years ago

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842022/

leilaicruz commented 3 years ago

To calculate fitness for a single gene, fitness must first be calculated for each transposon insertion, followed by averaging over all the insertions found within that gene to obtain a single fitness value (including a standard deviation).