SATAY-LL / SATAY-DOWNSTREAM-ANALYSIS

This repo contains some downstream analysis for satay data.
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Uncertainty fitness #19

Open leilaicruz opened 3 years ago

leilaicruz commented 3 years ago

basically what I did was expanding the uncertainty using the formula for the fitness (intergenic model). So basically is adding the uncertainty of computing the average reads per transposons per gene . I put two contributions , one from the reads distribution as the std and the other one from the transposon density as 1-density.
I use the propagation formula from the logarithm(intergenic formula) and from the ratio (for the reads/transposons) : image

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