Outlier analysis - Githubissues

SATAY-LL / SATAY-DOWNSTREAM-ANALYSIS

This repo contains some downstream analysis for satay data.

0 stars 1 forks source link

Outlier analysis #6

Open FloorDolsma opened 3 years ago

FloorDolsma commented 3 years ago

I tried using the median instead of the mean for the average reads/ins for each gene. This does not seem to work.
I tried a method called Median Absolute Deviation (Huber, 1981) to remove outliers. I think this might help.

I opened a branch where I am working on this. https://github.com/SATAY-LL/SATAY-DOWNSTREAM-ANALYSIS/commit/f4f2fefcd92c6edcdb5bd441138c2d849f1ae811#diff-c09b9fc54af18bc1012820d1b6849ec0119b93437496b64adbd5b372c055440c