SATVILab pipeline issues

SATVILab / pipeline

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Write up proposal

#22 MiguelRodo opened 2 years ago
1
Identify main alternatives from https://github.com/wlandau/awesome-pipeline

#21 MiguelRodo opened 2 years ago
0
Understand `targets::tar_eval` and `targets::tar_eval_raw`

#20 MiguelRodo opened 2 years ago
0
Consider names for variables

#19 MiguelRodo opened 2 years ago
0
Compare to existing packages

#18 MiguelRodo opened 2 years ago
0
Add a function to view `var` more easily

#17 MiguelRodo opened 2 years ago
0
Consider how to create variables made from more than one variable

#16 MiguelRodo opened 2 years ago
0
Consider post `data-mod` transformations

#15 MiguelRodo opened 2 years ago
0
Consider adding a "." to allow all predictors other than those already specified

#12 MiguelRodo opened 2 years ago
0
Check for errors in `var`

#13 MiguelRodo opened 2 years ago
0
Consider what made the "old" `pipeline` package worse and how `targets` might make it better

#14 MiguelRodo opened 2 years ago
3
Implement `targets`

#11 MiguelRodo opened 3 years ago
1
Write default modeling functions for exploration and output

#10 MiguelRodo opened 3 years ago
0
Write default plotting functions for exploration and output

#9 MiguelRodo opened 3 years ago
0
Integrate with something that skips things that don't need to be run, like `Nextflow`, `Snakemake` or `targets`

#8 MiguelRodo closed 2 years ago
1
Integrate with something that ensure reproducibility, such as Docker or env

#7 MiguelRodo closed 2 years ago
1
Attach `p_dots` and `iter` within each run sub-function

#6 MiguelRodo closed 2 years ago
1
Remove prep_data_raw and prep_iter (perhaps keep iter?)

#5 MiguelRodo closed 2 years ago
1
Make the output from the pipeline sub-functions (preprocess, explore, etc.) be available to later functions as elements in lists

#4 MiguelRodo closed 2 years ago
1
Add od from alwaysloaded package, as open_folder was deleted as it was RStudio-specific

#3 MiguelRodo opened 3 years ago
1
Automatically record models that failed, but allow run to continue

#2 MiguelRodo closed 2 years ago
0
Perhaps evaluate using `p_dots` as a list environment

#1 MiguelRodo closed 2 years ago
1