SBRG / pymodulon

Python package for analyzing and visualizing iModulons
MIT License
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Return an error when creating ica_data object without optimization #76

Closed avsastry closed 3 years ago

avsastry commented 3 years ago

When creating the ica_data object for the first time, there are three options for cutoffs: (1) use non-paramteric k-means, (2) optimize thresholds for d'agostino cutoff, or (3) use a default cutoff of 550. Option 3 is the default, but this is an error-prone option. If this option is selected and the cutoffs are not optimized, then an warning should be sent to the user.