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SBU-BMI / wsinfer

🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
https://wsinfer.readthedocs.io
Apache License 2.0
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[ENH] adds ability to run inference inside ROI #114

Closed kaczmarj closed 1 year ago

kaczmarj commented 1 year ago

adds --roi-dir to wsinfer run.

also adds shapely and geojson to the dependencies.

fixes #108