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SBU-BMI / wsinfer

🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
https://wsinfer.readthedocs.io
Apache License 2.0
56 stars 9 forks source link

remove large_image dependency #131

Closed kaczmarj closed 1 year ago

kaczmarj commented 1 year ago

using large_image restricts us to linux systems. we would like to support windows and macos as well

kaczmarj commented 1 year ago

132 introduces optimizations for macos. removing (or relaxing) the large-image dependency will allow us to use this in mac.

kaczmarj commented 1 year ago

to replace large-image, we can use openslide and tifffile. those can be installed on linux, windows, and macos. we can use tifffile to grab the mpp iff openslide cannot read it.