SCA-IRCM / SingleCellSignalR_v1

R package
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customized mm2Hs #21

Closed mengyixu closed 3 years ago

mengyixu commented 4 years ago

Hi, Thanks for developing this great tool. I tried to analyze the potential ligand-receptor pairs in my mouse single-cell sequencing data by cell_signal. I noticed that Calca -> Calcrl didn’t show up in the result. Therefore, I checked the mm2Hs database and found that I lost Calca when the function converted the mouse gene into human, because the mouse orthology confidence equals to 0 in the database. Do you know how can I customize the mm2Hs database I use to get Calca -> Calcrl back? Best