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SIESTA-eu / wp15

work package 15, use case 2
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Create a bidscrambler for EEG data in the BrainVision Core format #28

Closed robertoostenveld closed 2 days ago

robertoostenveld commented 4 weeks ago

The BrainVision Core file format is one of the file formats for EEG data supported in BIDS. Compared to the EEGLAB file format (which is also supported), it is much simpler to read and write. Hence I propose that we first implement a scrambler for this format.

One EEG recording consists of an ascii .vhdr (header) and .vmrk (marker/events/trigger) file, plus a data file with the actual EEG data. The data file often has the extension .eeg, but that extension is not required. The data file name (including extension) is specified inside the header file.

Both header and marker file resemble the windows-ini and the TOML file format.

In principle the data file can be either ASCII or binary, and either serialized or multiplexed (and all those files exist in the wild), but the formal 1.0 specification PDF prescribes that it must be multiplexed binary (which makes things much simpler).

schoffelen commented 4 weeks ago

To remind myself: MNE python relies on https://github.com/bids-standard/pybv for their (somewhat limited, i.e. it does not support a round trip in reading and writing) Brainvision IO

Note: the pybv readme recommends using MNE-python for the reading of (raw) brainvision files...

schoffelen commented 4 weeks ago

I will have a stab at this one.

robertoostenveld commented 2 days ago

Note that this issue was duplicated in #31 and has been implemented with pull request #32