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SMI / SmiServices

Scale-able loading, linking and anonymisation of DICOM images for healthcare research environments (e.g. Safe Havens)
GNU General Public License v3.0
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[feature] generate linkage CSV of UIDs to FilePath for extractions #1842

Open rkm opened 5 months ago

rkm commented 5 months ago

We have received a request to create a CSV file which links DICOM UIDs to the output FilePath to improve the ease of creating downstream scripts.

This should be a simple CSV with header StudyInstanceUID,SeriesInstanceUID,SOPInstanceUID,FilePath

jas88 commented 5 months ago

I have a tool for this called DicomAudit which matches that with a different order and the addition of Modality.

howff commented 5 months ago

Oh, my tool for reviewing DICOM images for PII burned into the pixels is called dcmaudit - possible naming confusion!

jas88 commented 5 months ago

I'd already used dsm2csv for the SR ICD11 extraction tool, but they have a fair bit in common - maybe I'll merge the two under that name and retire the DicomAudit one.