Find a tool from a tool registry that's relevant to the measurement from Sparc portal

SPARC-FAIR-Codeathon / 2024-team-2

A python tool to automatically assemble models and tools into workflows, for processing and interpreting SPARC datasets in accordance with FAIR principles

https://pypi.org/project/sparc-assemble/

Apache License 2.0

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Find a tool from a tool registry that's relevant to the measurement from Sparc portal #30

Closed JialiXu12 closed 4 weeks ago

JialiXu12 commented 1 month ago

Find a tool that's relevant to the measurement

Future work: Run the workflow with the measurement and the tool provided (Dockstore)

JialiXu12 commented 1 month ago

Tool: https://workflowhub.eu/workflows/525 https://github.com/BiodataAnalysisGroup/CWL_HTS_pipelines/tree/main/ChIP_Seq Dataset: https://sparc.science/datasets/282?type=dataset&datasetDetailsTab=abstract&path=files/primary/sub-20181004P/sam-20181004P-dC @PrasadBabarendaGamage

chinchien-lin commented 1 month ago

Hi @JialiXu12 is this completed?