API: Move Mainfest to root

[chinchien-lin]

Update the add_datqa function

Relates to #80 #84

[LinkunGao]

• Add a new function in dataset class:

   def add_data(self, source_path, data_type, subject, sample, sds_parent_dir=None, copy=True, overwrite=False, sample_metadata={}, subject_metadata={}):

  • use dataset.add_data( data_type='primary') to call add_primary_data
  • use dataset.add_data( data_type='derivative') to call add_derivative_data
• Modified destination_folder variable in add_primary_data and add_derivative_data:
  • use destination_folder_list instead.
  • from destination_folder = '/tem/data/primary/subject/sample'
  • to destination_folder_list = ['tem/data', 'primary', 'subject', 'sample' ]
  • the benefits for this is we can easily to combine different paths in other functions, in order to we can save manifest.xlsx in root folder.
• tested on SDS version 2.0.0

[chinchien-lin]

Resolved by #89