Address issues with MON pipeline

SPI-Birds / pipelines

Pipelines for generating a standard data format for bird data

2 stars 6 forks source link

Address issues with MON pipeline #137

Open ChloeRN opened 4 years ago

ChloeRN commented 4 years ago

There appear to be some problems with running the MON pipeline. Both @StefanVriend get several warnings when running the pipelines, and when I run it on Mac, I further get errors for the populations MON and MTV (these errors do not obviously look like Mac-only issues, and may be related to the warnings). We should check what is going on here.

StefanVriend commented 4 years ago

When running run_pipelines(PopID = c("MON", "MTV")), an error is thrown at line 677 of "format_MON.R": Error: No more ticks.

I'm not sure whether this is related, but dplyr::progress_estimated is deprecated, since "providing progress bars is not the responsibility of dplyr. Instead, you might try the more powerful progress package."

LiamDBailey commented 4 years ago

@ChloeRN what errors do you get on Mac?

ChloeRN commented 3 years ago

@LiamDBailey I used to get the same error as @StefanVriend reported above. However, when I ran the pipeline just now, everything was fine...

LiamDBailey commented 3 years ago

hmm ok, I haven't changed this yet...I'll try it on mine systematically and see if I can reproduce the error 🤔