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STAR-Fusion / STAR-Fusion

STAR-Fusion codebase
BSD 3-Clause "New" or "Revised" License
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conda install v1.12.0 has no result #364

Open qquuzhao opened 1 year ago

qquuzhao commented 1 year ago

I used conda to install v1.12.0 to getfusionresult, allsample has no result,but v1.10.0 has someresult.I do the diffrernce ，maybe condabin/lib/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes，this script changed has no result.Looking forward to your reply！

brianjohnhaas commented 1 year ago

One of the key differences between v1.10 and v1.12 is that the newer release runs STAR in single-pass mode instead of two-pass mode to remove bias based on data set composition. This could account for some differences, but overall accuracy is largely unchanged.

On Mon, Jul 3, 2023 at 12:02 AM qquuzhao @.***> wrote:

I used conda to install v1.12.0 to getfusionresult, allsample has no result,but v1.10.0 has someresult.I do the diffrernce ，maybe condabin/lib/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes，this script changed has no result.Looking forward to your reply！

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