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STEllAR-GROUP / octotiger

Astrophysics program simulating the evolution of star systems based on the fast multipole method on adaptive Octrees
http://octotiger.stellar-group.org/
Boost Software License 1.0
48 stars 18 forks source link

Cannot compile `frontier_experimental` on Perlmutter. #492

Closed JiakunYan closed 6 months ago

JiakunYan commented 6 months ago

@G-071 I am getting the following errors.

==> Installing octotiger-master-wtyzgorjqyqn633yojmqr7bbzk7iax2b
==> No binary for octotiger-master-wtyzgorjqyqn633yojmqr7bbzk7iax2b found: installing from source
==> No patches needed for octotiger
==> octotiger: Executing phase: 'cmake'
==> octotiger: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
    '/usr/bin/make' '-j16'

5 errors found in build log:
     833       124 |         hpx::apply<typename node_server::send_hydro_flux_correct_action>(get_unmanaged_gid(), std::move(data), face, ci);
     834           |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     835     /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-master-654ipffu7k7fuhm6ksty3ydyoytfn372/include/hpx/async_distributed/d
             etail/post.hpp:711:17: note: declared here
     836       711 |     inline bool apply(Ts&&... ts)
     837           |                 ^~~~~
     838     /global/homes/j/jackyan/workspace/octotiger/src/node_server_actions_3.cpp: In member function 'void node_server::execute_solver(bool, node_count_type)'
             :
  >> 839     /global/homes/j/jackyan/workspace/octotiger/src/node_server_actions_3.cpp:360:77: error: 'Op' was not declared in this scope
     840       360 |                 auto time_start = std::chrono::high_resolution_clock::now();Op
     841           |                                                                             ^~
     842     In file included from /global/homes/j/jackyan/workspace/octotiger/src/grid_scf.cpp:17:
     843     /global/homes/j/jackyan/workspace/octotiger/octotiger/util.hpp: In instantiation of 'int lprint(const char*, const char*, Args&& ...) [with Args = {lon
             g long int&, double&, double&, double&, double&, double&, double&, double&, const double&, double&, double&, double&, double&, double&, double, double&
             , double&, double&, const double&, const double&, const double&, const double&, double&, double&, double&}]':
     844     /global/homes/j/jackyan/workspace/octotiger/src/grid_scf.cpp:650:9:   required from here
     845     /global/homes/j/jackyan/workspace/octotiger/octotiger/util.hpp:45:44: warning: 'decltype(auto) hpx::threads::run_as_os_thread(F&&, Ts&& ...) [with F = 
             lprint<long long int&, double&, double&, double&, double&, double&, double&, double&, const double&, double&, double&, double&, double&, double&, doubl
             e, double&, double&, double&, const double&, const double&, const double&, const double&, double&, double&, double&>(const char*, const char*, long lon
             g int&, double&, double&, double&, double&, double&, double&, double&, const double&, double&, double&, double&, double&, double&, double&&, double&, d
             ouble&, double&, const double&, const double&, const double&, const double&, double&, double&, double&)::<lambda()>; Ts = {}]' is deprecated: hpx::thre
             ads::run_as_os_thread is deprecated, use hpx::run_as_os_thread instead (This functionality is deprecated starting HPX V1.10 and will be removed in the 
             future. You can define HPX_HAVE_DEPRECATION_WARNINGS_V1_10=0 to acknowledge that you have received this warning.) [-Wdeprecated-declarations]

     ...

     883                      from /global/homes/j/jackyan/workspace/octotiger/octotiger/diagnostics.hpp:11,
     884                      from /global/homes/j/jackyan/workspace/octotiger/octotiger/grid.hpp:14,
     885                      from /global/homes/j/jackyan/workspace/octotiger/src/grid_scf.cpp:8:
     886     /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-master-654ipffu7k7fuhm6ksty3ydyoytfn372/include/hpx/runtime_local/run_a
             s_os_thread.hpp:39:20: note: declared here
     887        39 |     decltype(auto) run_as_os_thread(F&& f, Ts&&... ts)
     888           |                    ^~~~~~~~~~~~~~~~
  >> 889     /global/homes/j/jackyan/workspace/octotiger/src/node_server_actions_3.cpp:396:41: error: 'diags' was not declared in this scope
     890       396 |                         const real dx = diags.com[1][XDIM] - diags.com[0][XDIM];
     891           |                                         ^~~~~
     892     /global/homes/j/jackyan/workspace/octotiger/src/node_server_actions_3.cpp:420:55: warning: 'decltype(auto) hpx::threads::run_as_os_thread(F&&, Ts&& ...
             ) [with F = node_server::execute_solver(bool, node_count_type)::<lambda()>; Ts = {}]' is deprecated: hpx::threads::run_as_os_thread is deprecated, use 
             hpx::run_as_os_thread instead (This functionality is deprecated starting HPX V1.10 and will be removed in the future. You can define HPX_HAVE_DEPRECATI
             ON_WARNINGS_V1_10=0 to acknowledge that you have received this warning.) [-Wdeprecated-declarations]
     893       420 |                         hpx::threads::run_as_os_thread([=]() {
     894           |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
     895       421 |                                 FILE *fp = fopen((opts().data_dir + "step.dat").c_str(), "at");

     ...

     1071    [ 50%] Building CXX object CMakeFiles/octolib.dir/src/io/silo_in.cpp.o
     1072    /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/kokkos_launch_compiler /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/nvcc_wrapper /global/u1/j
             /jackyan/workspace/spack/lib/spack/env/gcc/g++ /global/u1/j/jackyan/workspace/spack/lib/spack/env/gcc/g++ -DCPPUDDLE_HAVE_HPX -DCPPUDDLE_HAVE_HPX_AWARE
             _ALLOCATORS -DCPPUDDLE_HAVE_MAX_NUMBER_GPUS=4 -DCPPUDDLE_HAVE_NUMBER_BUCKETS=128 -DH5_BUILT_AS_DYNAMIC_LIB -DHPX_KOKKOS_CUDA_FUTURE_TYPE=0 -DHPX_KOKKOS
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             DOCTOTIGER_HAVE_KOKKOS -DOCTOTIGER_HAVE_QUADMATH -DOCTOTIGER_HAVE_VC -DOCTOTIGER_KOKKOS_HYDRO_TASKS=1 -DOCTOTIGER_KOKKOS_MONOPOLE_TASKS=1 -DOCTOTIGER_K
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             I/global/u1/j/jackyan/workspace/octotiger/spack-build/_deps/kokkossimd-src -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gc
             c-12.3.0/hpx-master-654ipffu7k7fuhm6ksty3ydyoytfn372/include -isystem /opt/nvidia/hpc_sdk/Linux_x86_64/23.9/cuda/12.2/include -isystem /opt/nvidia/hpc_
             sdk/Linux_x86_64/23.9/math_libs/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/boost-1.82.0-m7ctnqudgeuaj
             opl7rzh4bnpe2t2zfrf/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/asio-1.21.0-2uxagrjirzugppuuito6y3gw62
             f2vify/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/silo-4.11-r3tpfqq3klr6bn5uzu5uid2u33jgnchl/include 
             -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hdf5-1.14.1-2-k4r6uijq2qg32lull65pauugqfwaxfig/include -isystem /g
             lobal/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/zlib-1.2.13-2swgzmmeg3yzdtaikdxsp5ukrsj4drsy/include -isystem /global/u1/j/ja
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              -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/include -isystem /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-kokkos-0.4.0-lsntdno5man5eh3t5j5ij4y3ewbkgoq5/include -Wno-cpp -fPIC -O3
              -DNDEBUG -fPIC -pthread -march=znver3 -mtune=znver3 -expt-extended-lambda -Wext-lambda-captures-this -expt-relaxed-constexpr -arch=sm_80 -std=c++17  -
             isystem /opt/nvidia/hpc_sdk/Linux_x86_64/23.9/cuda/12.2/targets/x86_64-linux/include --host-only -MD -MT CMakeFiles/octolib.dir/src/io/silo_in.cpp.o -M
             F CMakeFiles/octolib.dir/src/io/silo_in.cpp.o.d -o CMakeFiles/octolib.dir/src/io/silo_in.cpp.o -c /global/homes/j/jackyan/workspace/octotiger/src/io/si
             lo_in.cpp
     1073    [ 51%] Building CXX object CMakeFiles/octolib.dir/src/monopole_interactions/legacy/cuda_monopole_interaction_interface.cpp.o
     1074    /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/kokkos_launch_compiler /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/nvcc_wrapper /global/u1/j
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             I/global/u1/j/jackyan/workspace/octotiger/spack-build/_deps/kokkossimd-src -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gc
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             opl7rzh4bnpe2t2zfrf/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/asio-1.21.0-2uxagrjirzugppuuito6y3gw62
             f2vify/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/silo-4.11-r3tpfqq3klr6bn5uzu5uid2u33jgnchl/include 
             -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hdf5-1.14.1-2-k4r6uijq2qg32lull65pauugqfwaxfig/include -isystem /g
             lobal/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/zlib-1.2.13-2swgzmmeg3yzdtaikdxsp5ukrsj4drsy/include -isystem /global/u1/j/ja
             ckyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/cppuddle-git.e4b42ba5e550c125aadc586f964126564efb76e6=0.3.1-git.4-3a6ezoya3b7rq7nwgz4eueud
             ukl6yfot/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/vc-1.4.1-b2oixjujurkio3cbeb4gk6nd2u5cn22z/include
              -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/include -isystem /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-kokkos-0.4.0-lsntdno5man5eh3t5j5ij4y3ewbkgoq5/include -Wno-cpp -fPIC -O3
              -DNDEBUG -fPIC -pthread -march=znver3 -mtune=znver3 -expt-extended-lambda -Wext-lambda-captures-this -expt-relaxed-constexpr -arch=sm_80 -std=c++17  -
             expt-relaxed-constexpr -MD -MT CMakeFiles/octolib.dir/src/monopole_interactions/legacy/cuda_monopole_interaction_interface.cpp.o -MF CMakeFiles/octolib
             .dir/src/monopole_interactions/legacy/cuda_monopole_interaction_interface.cpp.o.d -o CMakeFiles/octolib.dir/src/monopole_interactions/legacy/cuda_monop
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     1075    [ 52%] Building CXX object CMakeFiles/octolib.dir/src/monopole_interactions/legacy/monopole_interaction_interface.cpp.o
     1076    /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/kokkos_launch_compiler /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/bin/nvcc_wrapper /global/u1/j
             /jackyan/workspace/spack/lib/spack/env/gcc/g++ /global/u1/j/jackyan/workspace/spack/lib/spack/env/gcc/g++ -DCPPUDDLE_HAVE_HPX -DCPPUDDLE_HAVE_HPX_AWARE
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             _SYCL_FUTURE_TYPE=0 -DHPX_LIBRARY_EXPORTS -DHPX_WITH_CUDA -DKOKKOS_DEPENDENCE -DOCTOTIGER_GRIDDIM=8 -DOCTOTIGER_HAVE_BLAST_TEST -DOCTOTIGER_HAVE_CUDA -
             DOCTOTIGER_HAVE_KOKKOS -DOCTOTIGER_HAVE_QUADMATH -DOCTOTIGER_HAVE_VC -DOCTOTIGER_KOKKOS_HYDRO_TASKS=1 -DOCTOTIGER_KOKKOS_MONOPOLE_TASKS=1 -DOCTOTIGER_K
             OKKOS_MULTIPOLE_TASKS=1 -DOCTOTIGER_KOKKOS_SIMD_AUTOMATIC_DISCOVERY -DOCTOTIGER_MAX_NUMBER_FIELDS=15 -DOCTOTIGER_THETA_MINIMUM=0.34 -D_FILE_OFFSET_BITS
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             I/global/u1/j/jackyan/workspace/octotiger/spack-build/_deps/kokkossimd-src -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gc
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             opl7rzh4bnpe2t2zfrf/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/asio-1.21.0-2uxagrjirzugppuuito6y3gw62
             f2vify/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/silo-4.11-r3tpfqq3klr6bn5uzu5uid2u33jgnchl/include 
             -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hdf5-1.14.1-2-k4r6uijq2qg32lull65pauugqfwaxfig/include -isystem /g
             lobal/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/zlib-1.2.13-2swgzmmeg3yzdtaikdxsp5ukrsj4drsy/include -isystem /global/u1/j/ja
             ckyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/cppuddle-git.e4b42ba5e550c125aadc586f964126564efb76e6=0.3.1-git.4-3a6ezoya3b7rq7nwgz4eueud
             ukl6yfot/include -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/vc-1.4.1-b2oixjujurkio3cbeb4gk6nd2u5cn22z/include
              -isystem /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/kokkos-4.0.01-5kej5mmdwf4qifgwechzpshoefv636lx/include -isystem /
             global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-kokkos-0.4.0-lsntdno5man5eh3t5j5ij4y3ewbkgoq5/include -Wno-cpp -fPIC -O3
              -DNDEBUG -fPIC -pthread -march=znver3 -mtune=znver3 -expt-extended-lambda -Wext-lambda-captures-this -expt-relaxed-constexpr -arch=sm_80 -std=c++17  -
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             ns/legacy/monopole_interaction_interface.cpp.o -MF CMakeFiles/octolib.dir/src/monopole_interactions/legacy/monopole_interaction_interface.cpp.o.d -o CM
             akeFiles/octolib.dir/src/monopole_interactions/legacy/monopole_interaction_interface.cpp.o -c /global/homes/j/jackyan/workspace/octotiger/src/monopole_
             interactions/legacy/monopole_interaction_interface.cpp
  >> 1077    make[2]: *** [CMakeFiles/octolib.dir/build.make:303: CMakeFiles/octolib.dir/src/node_server_actions_3.cpp.o] Error 1
     1078    make[2]: *** Waiting for unfinished jobs....
     1079    /global/homes/j/jackyan/workspace/octotiger/octotiger/common_kernel/struct_of_array_data.hpp(39): warning #815-D: type qualifier on return type is mean
             ingless
     1080              inline component_type* const get_pod() {
     1081                                     ^
     1082    
     1083    Remark: The warnings can be suppressed with "-diag-suppress <warning-number>"

     ...

     2034      470 |                         hpx::apply(static_cast<hpx::cuda::experimental::cuda_executor>(executor),
     2035          |           ^             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     2036    /global/u1/j/jackyan/workspace/spack/opt/spack/linux-sles15-zen3/gcc-12.3.0/hpx-master-654ipffu7k7fuhm6ksty3ydyoytfn372/include/hpx/async_base/post.hpp
             :64:1: note: declared here
     2037       64 |     HPX_FORCEINLINE bool apply(F&& f, Ts&&... ts)
     2038          | ^   ~
     2039    make[2]: Leaving directory '/global/u1/j/jackyan/workspace/octotiger/spack-build'
  >> 2040    make[1]: *** [CMakeFiles/Makefile2:168: CMakeFiles/octolib.dir/all] Error 2
     2041    make[1]: Leaving directory '/global/u1/j/jackyan/workspace/octotiger/spack-build'
  >> 2042    make: *** [Makefile:139: all] Error 2
     2043    ==> octotiger: Executing phase: 'install'
     2044    ==> [2024-04-02-10:12:36.091716] '/usr/bin/make' '-j16' 'install'
     2045    /global/common/software/nersc/pm-2021q4/sw/cmake-3.22.0/bin/cmake -S/global/homes/j/jackyan/workspace/octotiger -B/global/u1/j/jackyan/workspace/octoti
             ger/spack-build --check-build-system CMakeFiles/Makefile.cmake 0
     2046    /global/common/software/nersc/pm-2021q4/sw/cmake-3.22.0/bin/cmake -E cmake_progress_start /global/u1/j/jackyan/workspace/octotiger/spack-build/CMakeFil
             es /global/u1/j/jackyan/workspace/octotiger/spack-build//CMakeFiles/progress.marks
     2047    /usr/bin/make  -f CMakeFiles/Makefile2 all
     2048    make[1]: Entering directory '/global/u1/j/jackyan/workspace/octotiger/spack-build'
G-071 commented 6 months ago

@JiakunYan Can this issue be closed now that you got the build to work?

JiakunYan commented 6 months ago

Sorry, forgot about this. It has been resolved.