search

STOmics / SAW

GNU General Public License v3.0
143 stars 34 forks source link

version `GCC_4.8.0' not found #166

Open SuqinYang opened 3 hours ago

SuqinYang commented 3 hours ago

Hello, I downloaded the SAW from "https://cdn-newfile.stomics.tech/saw-8.1.0.tar.gz" and unzipped it using the code "tar -xzf saw-8.1.0.tar.gz". But when I ran "./saw-8.1.0/bin/saw count --help" and I got the error :

Traceback (most recent call last): File "/tmp/onefile_257079_1731754644_119708/saw", line 20, in File "/tmp/onefile_257079_1731754644_119708/h5py/init.py", line 33, in File "/tmp/onefile_257079_1731754644_119708/h5py/version.py", line 17, in File "/tmp/onefile_257079_1731754644_119708/numpy/init.py", line 140, in File "/tmp/onefile_257079_1731754644_119708/numpy/core/init.py", line 23, in File "/tmp/onefile_257079_1731754644_119708/numpy/core/multiarray.py", line 10, in File "/tmp/onefile_257079_1731754644_119708/numpy/core/overrides.py", line 6, in ImportError: /share/apps/software/MatlabR2016a/sys/os/glnxa64/libgcc_s.so.1: version `GCC_4.8.0' not found (required by /tmp/onefile_257079_1731754644_119708/numpy/core/../../libgfortran-040039e1.so.5.0.0)

I don't have root access，do you have any good suggestions for fixing this error? Thank you so much!

Clouate commented 2 hours ago

Hi, could you confirm whether the file saw-8.1.1/anaconda/lib/libgcc_s.so.1 and the soft link saw-8.1.1/anaconda/x86_64-conda-linux-gnu/lib/libgcc_s.so.1 exists? Is the MD5 of saw-8.1.0.tar.gz correct and the unzip process complete? Or you could try to remove '/share/apps/software/MatlabR2016a/sys/os/glnxa64' from your environment variable LD_LIBRARY_PATH, or use conda to create a new empty environment and try again