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STOmics / Stereopy

A toolkit of spatial transcriptomic analysis.
MIT License
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Conversion of GEM and GEF file formats #121

Closed Taoli0113 closed 1 year ago

Taoli0113 commented 1 year ago

Hello, how can I use Python to convert gef and gem file formats? I remember there was a tutorial before, but I can't find it now. Can you provide me with this Python code or tutorial? And I have already installed Stereopy.Thank you！

LyonLen commented 1 year ago

We don't have methods to do conversion between gem and gef . Instead, you can follow the gefpy tutorials trying: https://gefpy.readthedocs.io/en/latest/Examples.html Hope these can help~

Taoli0113 commented 1 year ago

Well, thank you very much！

Taoli0113 commented 1 year ago

Thank you very much, this was very helpful to me, and now the problem has been solved!

在 2023-05-09 17:12:51，"LyonLen" @.***> 写道：

We don't have methods to do conversion between gem and gef . Instead, you can follow the gefpy tutorials trying: https://gefpy.readthedocs.io/en/latest/Examples.html Hope these can help~

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