Closed Feng-Zhang closed 11 months ago
the database should be installed together with stereopy, please to check whether exists in directory ~/bin/miniconda3/envs/stPy/lib/python3.8/site-packages/stereo/data/algorithm/cell_cell_communication/database
There is no ~/bin/miniconda3/envs/stPy/lib/python3.8/site-packages/stereo/data/ directory. How should I fix this issue?
Try to reinstall the stereopy
: pip install --use-pep517 --force-reinstall stereopy==0.13.0b1
Thank you. It works.
I try to run the code from https://stereopy.readthedocs.io/en/latest/Tutorials/Cell_Cell_Communication.html. When I run
it give the error as shown in below:
It seems that the database file can't be find.