STOmics / Stereopy

A toolkit of spatial transcriptomic analysis.
MIT License
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ValueError: '_buffers' is not a parameter of PolyEdit08625 in "High Resolution Matrix Export"? #199

Closed Li-ZhiD closed 9 months ago

Li-ZhiD commented 10 months ago

Error below when I want lasso area from raw STO data?

Traceback (most recent call last): File "/home/robot/.local/lib/python3.8/site-packages/pyviz_comms/init.py", line 340, in _handle_msg self._on_msg(msg) File "/home/robot/.local/lib/python3.8/site-packages/holoviews/plotting/bokeh/callbacks.py", line 155, in on_msg stream.update(processed_msg) File "/home/robot/.local/lib/python3.8/site-packages/holoviews/streams.py", line 441, in update self._set_stream_parameters(kwargs) File "/home/robot/.local/lib/python3.8/site-packages/holoviews/streams.py", line 422, in _set_stream_parameters self.param.set_param(**kwargs) File "/home/robot/.local/lib/python3.8/site-packages/param/parameterized.py", line 1925, in setparam return self.update(kwargs) File "/home/robot/.local/lib/python3.8/site-packages/param/parameterized.py", line 1889, in update raise ValueError("'%s' is not a parameter of %s" % (k, self_or_cls.name)) ValueError: '_buffers' is not a parameter of PolyEdit08625

Zhenbin24 commented 9 months ago

hello, For software version issues, execute directly: pip install pyviz-comms==2.2.1 -i https://pypi.tuna.tsinghua.edu.cn/simple

Li-ZhiD commented 9 months ago

I reinstalled pyviz-comms==2.2.1. Despite no error information occurring, nothing was obtained after clicking the 'export' button.

Zhenbin24 commented 9 months ago

The example in this article(https://stereopy.readthedocs.io/en/latest/Tutorials/Interactive_Cluster.html) is missing a step ins.add_select_area(); image

It is recommended to refer to this article for examples:https://stereopy.readthedocs.io/en/latest/Tutorials/High_Resolution_Export.html