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STOmics / Stereopy

A toolkit of spatial transcriptomic analysis.
MIT License
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When input GEM at cell level(Cell bins), there is no dnbCount, cell area and cell border information. #260

Closed JYWANG-UCAS closed 2 months ago

JYWANG-UCAS commented 3 months ago

Hi, I input Gem file at cell bin level, and I couldn't find cell area and cell border information. packages : stereopy 1.1.0 1711899337986

1711899292445

1711899366240

JYWANG-UCAS commented 3 months ago

Is there a solution? Thank you

tanliwei-coder commented 3 months ago

These information are not saved in GEM files, if you want to use them, you can use the corresponding GEF files.