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SUNCAT-Center / catmap

Catalyst Micro-kinetic Analysis Package for automated creation of micro-kinetic models used in catalyst screening
GNU General Public License v3.0
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mkm_job.py recursive process fail #122

Closed reduck96 closed 5 years ago

reduck96 commented 5 years ago

Hi,

I met another problem like this in tutorial (3-refining_microkinetic_model)

[tgmadmin@UOS-YOO 3-refining_microkinetic_model]$ python3 mkm_job.py Traceback (most recent call last): File "mkm_job.py", line 5, in model = ReactionModel(setup_file=mkm_file) File "/TGM/Apps/PYTHON/3.6.9_for_CatMAP_20190718/lib/python3.6/site-packages/catmap/model.py", line 125, in init self.load(self.setup_file) File "/TGM/Apps/PYTHON/3.6.9_for_CatMAP_20190718/lib/python3.6/site-packages/catmap/model.py", line 384, in load exec(compile(open(setup_file, 'r').read(), '', 'exec'), globs, locs) File "", line 22, in File "/TGM/Apps/PYTHON/3.6.9_for_CatMAP_20190718/lib/python3.6/codecs.py", line 321, in decode (result, consumed) = self._buffer_decode(data, self.errors, final) UnicodeDecodeError: 'utf-8' codec can't decode byte 0x80 in position 0: invalid start byte

This error-message looks like an error I've seen before. I think it seems to be a problem of reading PKL file.

[tgmadmin@UOS-YOO 3-refining_microkinetic_model]$ python3 CO_oxidation.log Traceback (most recent call last): File "CO_oxidation.log", line 22, in binary_data = pickle.load(open("CO_oxidation.pkl")) File "/TGM/Apps/PYTHON/3.6.9_for_CatMAP_20190718/lib/python3.6/codecs.py", line 321, in decode (result, consumed) = self._buffer_decode(data, self.errors, final) UnicodeDecodeError: 'utf-8' codec can't decode byte 0x80 in position 0: invalid start byte

Thank you. Best regards, Jinwoo Park

3_ref_results.tar.gz

gusmaogabriels commented 5 years ago

Hi @reduck96,

please check if the problem has been fixed in the latest commit. #123

Best, Gabriel