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SUwonglab / scABC

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chroms getting switched #1

Closed timydaley closed 6 years ago

timydaley commented 7 years ago

peak in scABC: InSilicoSCABC$peaks[which(InSilicoSCABC$peaks[,2] == 112548510), ] chrom start end name pValue 31511 chr18 112548510 112550111 Peak_43677 24.67081

peak in file: grep 112548510 NoTreatment/6Lines/mergeAll.tn5.pf.gappedPeak chr10 112548510 112550111 Peak_43677 229 . 112548510 112550111 0 3 1,204,1 0,974,1600 3.76647 24.67081 22.90685

timydaley commented 7 years ago

Problem seems fixed. Not sure what happened or how I fixed it.