Add validation check for SAMPLE_ID

Sage-Bionetworks / Genie

Validation and processing of GENIE files

https://genie.synapse.org/

MIT License

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Add validation check for SAMPLE_ID #443

Closed hhunterzinck closed 2 years ago

hhunterzinck commented 2 years ago

cBioPortal file imports have an undocumented character limit of 50 for SAMPLE_IDs. This caused issues with the 12.2-consortium release with one site's IDs.

hhunterzinck commented 2 years ago

Check could be implemented here: https://github.com/Sage-Bionetworks/Genie/blob/8c450ae488d55f3f76daf24b08ede575fb96a910/genie/process_functions.py#L359