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Sage-Bionetworks / Genie

Validation and processing of GENIE files
https://genie.synapse.org/
MIT License
12 stars 9 forks source link

[GEN-996] convert the clinical template columns from a set to a list #554

Closed danlu1 closed 5 months ago

danlu1 commented 6 months ago

Problem: Run into ValueError: columns cannot be a set when upgrading to pandas >= 1.5 for Clinical.preprocess

Solution: Convert set to list

Test: unit test function has been added

sonarcloud[bot] commented 6 months ago

Quality Gate Passed Quality Gate passed

Issues
3 New issues
0 Accepted issues

Measures
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud

rxu17 commented 5 months ago

@danlu1 Feel free to merge in this PR.